Paralcaligenes sp. KSB-10: LSG25_04530
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Entry
LSG25_04530 CDS
T07761
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park00541
Biosynthesis of various nucleotide sugars
park01100
Metabolic pathways
park01250
Biosynthesis of nucleotide sugars
Module
park_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
park00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LSG25_04530 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
park01005
]
LSG25_04530 (rfaD)
Enzymes [BR:
park01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LSG25_04530 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
park01005
]
Core region
LSG25_04530 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
UHL65174
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Position
complement(988756..989751)
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AA seq
331 aa
AA seq
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MIIVTGGAGFIGSNLVAGLNRRGYTDIMVVDDLTEGDKFINLVDGKIADYLHKDDFRQRV
ARKQFANIEAVIHQGACSDTTERNGHYMLDNNYRVTLELFEYCQAHKVPFLYASSAAVYG
AGPVYAENPVHESPLNVYGYSKYLFDQVLRRHLSELAAPVVGLRYFNVYGPNEQHKGRMA
SVAFHNMNQFRAEGHVRLFGGWDGYANGGQLRDFVFVDDVVDVNLHFLDHSQKSGIFNCG
TGRAQPFNDVARTVVNTLRAEADLPELSLQELVDQQLIRYIPFPDDLKGRYQSHTEADMT
QLRSAGYKAPFRDVETGVAAYVRRLLEQGRL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtgacggggggcgccggctttatcggcagcaatctggtggcgggcctgaac
cgccgcggctataccgacatcatggtggtcgacgaccttaccgaaggcgacaaattcatc
aatctggtcgatggcaagattgccgattacctgcataaagacgatttccgccaacgggtg
gcacgcaagcaattcgccaatatcgaggcggtgattcatcaaggggcgtgttccgacact
accgagcgcaatggtcattacatgctcgacaacaattatcgggtaacgcttgagctgttc
gagtattgccaggcgcacaaggttccgtttttatatgcgtcgtcggccgctgtgtatggg
gcgggtccggtatatgcggaaaatccggtgcacgaatcgccgctcaatgtgtacggctat
tcaaaatacttgttcgatcaggttctgcggcgccatctgtccgaactggccgccccggtc
gtcggtttgcgttacttcaacgtttacggtcccaacgagcagcacaaaggccgcatggcg
tcggtggcgtttcacaacatgaaccaattcagggcggaagggcatgtgcgcctgtttggc
ggctgggatggctacgccaacggagggcagttgcgcgacttcgtttttgtcgacgacgtc
gtcgacgtcaacctgcattttctcgaccactctcaaaagtcgggcattttcaattgcgga
accgggcgcgcccagcctttcaacgatgtggcccgtaccgtcgtcaataccctgcgggcc
gaagccgatctgccggagctctccttgcaggaactggtcgaccagcaattgatacgctac
attccttttcccgacgatttgaagggtcgttatcaaagccacaccgaggccgatatgacg
cagttgcgttcggccggctacaaggcgccgtttcgcgacgtagagacgggagtggcggcc
tacgtgcggcgcttgctggagcagggccgcctttag
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