KEGG   Paralcaligenes sp. KSB-10: LSG25_07190
Entry
LSG25_07190       CDS       T07761                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
park  Paralcaligenes sp. KSB-10
Pathway
park02020  Two-component system
Brite
KEGG Orthology (KO) [BR:park00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LSG25_07190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:park02022]
    LSG25_07190
Two-component system [BR:park02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LSG25_07190
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA_16 AAA AAA_2 AAA_3 TadZ_N HTH_30 IstB_IS21 TIP49 HTH_17 NUDE_C Neugrin HALZ
Other DBs
NCBI-ProteinID: UHL65652
LinkDB
Position
complement(1575418..1576767)
AA seq 449 aa
MNTENPIPAAEGSLVYLIEDDEIVMHACGQALRLAGISVRGFGDAETALASVGGERPAAV
ICDVQLPGMGGMSLLVDLLRLDRNLPVILITGHGDISLAVEAMRAGAYDFIEKPFHSERL
VDVVRRAMERRALATENQRLKDQLQELQVTPLIGQSPAIQHVRKLIAALAPTSADLLVCG
ETGSGKEVLAKAIHTASGRRGAFVALNCAAVPESIFESEIFGHEAGAFTGAHRRRIGKIE
YAQGGTLFLDEIESMPLNLQAKLLRVLQERYVERLGSNTPIPVDCRVIAATKLDLKQACD
QGEFRADLYYRLNVVSIELPPLRKRLDDIPLLMAYFIAIAARRYQCEPPQWSGQDLLRWQ
QHDWPGNVRELRNTAERFCLGVEDGLAQPPDNADSLAYRMEQTEHELIQEALRSAAGNVV
HAAKLLKISRKTLYDKLNRLAIDPGSFRQ
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgaacacggaaaaccccattcccgccgctgaaggcagccttgtgtatttgatcgaggac
gatgaaatcgtcatgcatgcctgcgggcaggctttgcgtttggcgggcatttcggtgcgc
ggcttcggcgatgcggaaaccgcgctggccagcgttggcggcgaacggccggcagccgtg
atctgcgatgtacagcttcccggcatgggtggaatgtcgctgctggtcgatttgctgcgc
ctggatcgtaatttgcctgtgattctgattaccgggcacggcgatatttccctggcagtg
gaagccatgcgggctggcgcctacgatttcatcgagaaaccatttcattcggagcggctc
gtcgatgtggtccgccgggccatggagcgccgcgccctggccaccgaaaatcagcgcctg
aaagatcaattgcaagagttgcaggtaacccccctgattggccaatcgcccgcgatccag
catgtccgcaagctgatcgccgcgctggcgccgacctcggccgatttgctggtttgcggc
gaaactggatcgggcaaagaggtgctggcaaaagccatccacaccgccagcggcaggcgt
ggcgcctttgttgcgctgaattgcgcggcagtgcccgaaagtattttcgagagcgaaata
tttggccatgaggccggtgcgtttaccggagcgcatcgccgtcgtatcggaaaaatcgaa
tatgcccagggcggcacgctgttcctggacgaaatcgaatccatgccgctgaatttgcag
gctaaattgctgcgcgtgctgcaggagcgctacgtggagcggctaggcagcaatacgccg
ataccggtcgattgccgggtaatagcggcaaccaagctggacctcaagcaggcctgcgac
cagggcgagttccgggccgacctgtattaccgcctgaatgttgtgtccatcgagttgccg
cccttgcgtaaacggctcgatgacatcccgttgctcatggcgtatttcattgccattgcg
gcgcggcggtatcaatgcgagccgccgcaatggtccggccaggacttgctgcgctggcaa
cagcacgactggccgggcaatgtgcgtgaattgcggaacaccgccgagcgattctgcctg
ggtgttgaagacggtctggcgcagcctcccgacaatgccgactccctggcgtatcgcatg
gaacaaacggaacatgaattgatacaggaggcgctgcgcagcgctgcaggcaatgtggtg
catgcggcaaagctattgaagatttcgcgcaagaccttgtatgacaaactgaatcgcctg
gcgatcgatcccggcagcttccgtcagtga

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