Paralcaligenes sp. KSB-10: LSG25_10425
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Entry
LSG25_10425 CDS
T07761
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LSG25_10425 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_10425 (ruvB)
Enzymes [BR:
park01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSG25_10425 (ruvB)
DNA repair and recombination proteins [BR:
park03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LSG25_10425 (ruvB)
RecFOR pathway proteins
LSG25_10425 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
nSTAND3
Rad17
AAA_3
AAA_14
DUF815
TIP49
Bac_DnaA
NTPase_1
RNA_helicase
AAA_17
TsaE
IstB_IS21
AAA_2
AAA_33
AAA_18
NB-ARC
Sigma54_activ_2
bpMoxR
AAA_28
AAA_24
AAA_25
ABC_tran
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UHL66308
LinkDB
All DBs
Position
2298134..2299198
Genome browser
AA seq
354 aa
AA seq
DB search
MAIHSDSLSSTPPAERIVAPQSTSPNEESVERALRPRALSEYVGQQRVCEQLDIFITAAK
NRGEALDHVLLFGPPGLGKTTLAHIVAHEMGVQLRQTSGPVLERAGDLAALLTNLEKNDV
LFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPSARSVKIDLQPFTLVGATTRAGMLTN
PLRDRFGIVSRLEFYNTDDLTHIVTRSARLLNAGLTSDGAIEIAKRARGTPRIANRLLRR
VRDYAEVKSNGKIDAAVAGAALAMLEVDPQGLDLMDRKLLEAIIHKFDGGPVGVDSLAAA
IGEERDTIEDVIEPYLIQHGYLQRTPRGRMATKTTWQHLGLAPPKAADSNELFS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggccattcattccgactcgctatccagcacgccccccgccgaacgcatcgttgcgccg
cagagcacctcgcccaatgaagaatcggtcgaacgggccttgcggccgcgcgcgctcagc
gaatatgtcggccagcagcgcgtctgcgaacagctcgatatctttatcacggccgcgaaa
aaccgcggcgaggcgctggaccatgtcttgctgttcgggccgcccgggctgggcaagacg
acactggcccacatcgtggcacacgaaatgggggtgcagttgcggcaaacctccggcccg
gtactggagcgtgccggcgatcttgccgccctgctgaccaatctggaaaaaaacgatgtg
ctgttcatcgacgaaattcaccggctgtcgccggtggtggaagaaattctctatccggcc
ctcgaagattttcaaatcgacatcctgatcggcgaagggccttcggcacgcagcgtcaag
atcgatctccaaccctttaccctggtgggcgccacgacacgcgccggcatgctgaccaat
ccgctgcgcgaccgcttcggcatcgtatcccgcctcgagttctacaacaccgacgacctg
acccacatcgtcacccgcagcgcccgcctgctcaatgccggcctgaccagcgacggcgcc
atcgaaatcgccaaacgcgcgcgcggaacgccccgcatcgccaatcggctactgcggcgc
gtacgcgactacgccgaggtcaagtccaatggcaagatagacgccgccgtggccggcgcg
gcccttgccatgctagaagtcgatccgcaaggcctcgacctcatggatcgcaaactgctc
gaagcgatcatccataaattcgacggcggcccggtcggagtcgacagcctggccgccgcc
ataggcgaagagcgcgataccatcgaagacgtcatcgagccctacctgattcagcatggc
tatctgcagcgtaccccgcgcggccgcatggccaccaaaacgacctggcagcacctgggc
ctggccccacccaaggccgcggacagcaacgaactgttttcctga
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