Paralcaligenes sp. KSB-10: LSG25_10430
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Entry
LSG25_10430 CDS
T07761
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LSG25_10430 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
park03019
]
LSG25_10430 (recQ)
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_10430 (recQ)
Enzymes [BR:
park01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSG25_10430 (recQ)
Messenger RNA biogenesis [BR:
park03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LSG25_10430 (recQ)
DNA repair and recombination proteins [BR:
park03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LSG25_10430 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Ligase_CoA_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
UHL62517
LinkDB
All DBs
Position
complement(2299423..2301255)
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AA seq
610 aa
AA seq
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MSASHKTILDTLQRVFGYESFRGDQQAIIEHLVDGGDALVLMPTGGGKSLCYQIPALVRS
GTGVVVSPLIALMQDQVDTLTELGVRAAFLNSTQDWRTAREVEQAFLAGELDLLYVAPER
LLTERCLELLAGGEIALFAIDEAHCVSQWGHDFRPEYLGLSILSERWPAVPRIALTATAT
TVTRREIAQRLDLTAARHFVSSFDRPNIRYRIVEKAEVKRQLLQFIQTEHQGDCGIVYGL
SRARVEDTAEFLCQHGIPALPYHAGLSAAVRAGNQSRFLREDGLVIVATIAFGMGIDKPD
VRFVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGEDLFRRR
LGSQLDAMLGLCETVSCRRQRLLAYFDQRIEPCGNCDTCLEPPQAWDGTVAAQKILSAVY
RLWRERGQRFGAGHLIDILRGKLTERIKQYEHQSLSVFGIGSDLSEQAWRGVFRQLLAQS
LLAVDQEGYGTLALTDASRQVLKGEKTLMLRREPEKTARSSRSTSTRRKEAEIVLPAEAQ
QRFEALRAWRAEVARSHGVPAYVIFHDATLREIAVQSPSSLDELSHISGVGLRKLEAYGE
ELLRNVRAAP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttcccacaaaacgatactcgataccctgcaacgcgtgtttggctatgagtct
ttccgcggcgatcagcaggccatcatcgagcatctcgtcgacggaggggacgccctggtt
ctgatgcccaccggcggcggcaaatcgctgtgctatcagattccagccttggtcaggtcc
ggcacaggggtggtggtatcgccgcttatcgccttgatgcaggaccaggtcgataccctg
accgagctgggcgtgcgggccgccttcctgaactcgacgcaggactggcgcacggctcgc
gaggtggaacaagccttcctggcgggcgagctggatcttttgtacgtggcacccgagcgt
ttgctgaccgagcgatgcctggagctgctggccggaggggagatcgccctgtttgccatt
gacgaggcccactgtgtttcgcagtgggggcacgatttccgcccggaataccttggcttg
tcgatcttgtcggagcgctggcctgcggtgcctcgcatagcgttgacggccaccgccacg
accgtgacccgccgggagatcgcgcagcgcctggacctgactgcggcgcgtcacttcgtt
tccagcttcgaccggcccaatatacgctaccgtattgtcgaaaaggccgaggtcaagcgc
cagttgctgcagttcatacagaccgagcatcagggcgattgcggcattgtttacggcctg
tcgcgcgccagggtcgaggataccgccgagttcctgtgccagcatggcattcccgccttg
ccgtaccacgccggcctgagcgccgccgtgcgcgctggaaatcagtcgcgcttcctgcgc
gaagacggcctggtcattgtggccacgatcgcgttcggcatgggcatagacaaacccgac
gtacgctttgtggcgcatatcgatctgcccaagtcggtcgagggctattaccaggaaacc
ggccgggccggccgcgatggcctgccggcgacggcctggctggcatatggcttgcaggac
gtggtgcagcagcgccgcatgatcgacgagtcgccgggcgaggacctgttccggcggcgc
ctcggatcgcagctcgatgcgatgctcggtttgtgcgaaaccgtatcgtgccggcgccag
cgcctgctggcctatttcgatcagcgcatcgagccttgcgggaactgcgatacctgcctg
gagccgccgcaagcctgggatggcacggttgccgcccagaaaatcctgtcggccgtgtat
cgtctctggcgcgagcgaggccagcgcttcggcgcggggcatctcatcgacattcttcgc
ggcaagctgactgagcgcatcaagcagtacgaacatcagagcctgagcgtattcggaatt
ggctcggatttgtccgagcaggcatggcgtggcgtctttcgtcaattgctcgcgcaaagc
ctgttggccgtggatcaggaaggctatggcaccctggccctgaccgacgcgagccgccag
gtgcttaagggggaaaagaccctcatgctcaggcgcgagccggaaaaaacggcgcgttcg
agccgatcgacaagtacgcgccgcaaagaagcggaaattgtcctgccggccgaggcgcag
cagcgtttcgaggctttgagggcctggcgtgccgaagtagcccgcagccatggcgtgccg
gcctatgtcattttccatgatgcgactttgcgtgaaatcgcggtgcagtcaccgtcgtct
ctggatgaactcagtcatatcagcggggtgggcctgcgcaagctcgaggcgtacggtgag
gaactgctgcgcaacgtgcgcgcggcgccgtag
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