Paralcaligenes sp. KSB-10: LSG25_13350
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Entry
LSG25_13350 CDS
T07761
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSG25_13350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
park03000
]
LSG25_13350
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_13350
Enzymes [BR:
park01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LSG25_13350
Transcription factors [BR:
park03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LSG25_13350
DNA repair and recombination proteins [BR:
park03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSG25_13350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UHL63053
LinkDB
All DBs
Position
complement(2909704..2910678)
Genome browser
AA seq
324 aa
AA seq
DB search
MDLDHNASSRGCPRRQPSRLANAAGSAVAQEAPAGPPGEIDILLPYRPPYDWASMLEFLR
RRAITGIETVSADCYARTMQLDGEQGMVAVRAADGNVLRATVRFSKPSVLPVIVARLSRV
FDLAVDPSVIAAHLAKDRVLAPLVKARPGLRVPGAWDGFELSMRAVLGQQITVAAAVRLA
GRMVAAHGEPLARPDGDLTHVFPRPETIAATDLASLGMPRSRAATLSAVAEAAIADTHLF
DTTGGLDEAVKRLRKIRGVGEWTAQYIALRQLHEPDAFPSADIGLMRAMARLEGRDYSSS
ELLARADAWRPWRAYAAQHLWTSG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgatcataacgccagttcccgcggatgcccgcgaaggcaaccctcgcggctc
gctaatgcagccggttcggctgtggcgcaggaggccccggccgggccacctggcgagatc
gacattttgctgccttatcgtcctccgtacgattgggcgtccatgctggaatttctgcgc
cggcgagccattaccggtatcgagaccgtctctgccgactgttatgcgcgtacgatgcag
ctggatggcgagcagggaatggttgccgtccgcgccgccgacggcaatgtcttgcgcgcg
acagtgcgattttccaagccctcggttttgccggtcatcgtcgcgcgactgagccgggtg
ttcgatctggcagtggatccctccgttattgcggcccatcttgccaaagaccgggtgctg
gctcctctggtgaaggcacggccgggcttgcgcgttccgggtgcctgggatggcttcgaa
ctgtctatgcgtgccgtgctggggcaacagattacggttgccgccgctgtgcgcctggcc
ggacgcatggttgccgctcatggcgagcccctggcgcggccggacggcgatttgacccat
gtgtttccaaggcccgagaccatagcggccacggatctggcgtctctgggaatgccccgc
agccgggcggcgacgctttccgctgtggcagaggccgccattgccgacacacatcttttc
gatacgaccggcgggcttgatgaagcggtgaagcgcttgcgcaagatccgtggcgtaggg
gagtggaccgcgcaatacattgccttgcgccagttgcacgagccggatgcctttccgtcc
gccgacatcggcctcatgcgcgcaatggccaggctggaagggcgggattattcttcatcc
gaacttctcgcccgagcggatgcctggcgtccgtggcgtgcttacgccgcgcaacacctt
tggacgtccggctga
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