Paralcaligenes sp. KSB-10: LSG25_16015
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Entry
LSG25_16015 CDS
T07761
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
park
Paralcaligenes sp. KSB-10
Brite
KEGG Orthology (KO) [BR:
park00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
park03016
]
LSG25_16015 (mnmE)
Transfer RNA biogenesis [BR:
park03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LSG25_16015 (mnmE)
Prokaryotic type
Methyltransferases
LSG25_16015 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Roc
AIG1
Ras
MCM
Arf
ABC_ATPase
AAA_25
ABC_tran
DUF815
AAA_29
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UHL63536
LinkDB
All DBs
Position
3493195..3494637
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AA seq
480 aa
AA seq
DB search
MTTHSTDPIVAIATAPGRGGIGVVRISGRDLGALIGRLFSSPLTPRHAHYLPFNDAAGNA
IDAGIALFFKGPNSYTGEDVLELQGHGGPAVLRRLQERCIELGHDLGLRHAEPGEFTQRA
FLNDRLDLAQAEAVADLIDASSEAAARSAMASLSGAFSAHVNALGDRIVHLRMLVEATLD
FPEEEIDFLEKYQARETLTGIQDDLRALTRQARQGMILREGLHVVLAGQPNVGKSSLLNA
LAGDDIAIVTPIAGTTRDKVIQQIHIQGVPIHIVDTAGLRDTDDTVESIGIARSWAEIEK
ADVIIHLQDARSRSDALDVAITSRLPARTPVLEVLNKTDLLDRLPGANDLSSVGSGQVGS
QDSDTPGDHGTHRASSQPAIAISAKTGAGLDVLRQKLLDIAGWNPGTESPWLARERHLHA
LQRADEHLAAAAEYASHNDQVLDLFAEELRLTHDALCSITGQFTSDDLLGEIFSSFCIGK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccattccaccgaccctatcgttgccattgccaccgcccccggacgcggcggc
atcggcgtcgtgcgcatttcgggacgcgacctgggcgcgctgatcggccggctgttcagc
tcgccgctgacgccgcgtcatgcccattacctgccattcaacgacgcagcgggcaacgcc
atcgacgcgggcatagcgctgttcttcaaagggcccaactcctacaccggcgaagatgtc
ctcgaactgcaggggcatggcggccccgccgtgctgcggcgcctgcaggaacgctgcatc
gagctgggccacgaccttggcctgcgccatgccgagccgggtgaatttacccagcgcgct
tttttgaacgacaggctcgatctggcccaggccgaggccgtggccgatctgatcgatgct
tcgtccgaagccgccgcccgcagtgccatggcctcgctgagcggcgccttttctgcccac
gtgaatgcgctgggcgaccgcatcgtgcatttgcgcatgcttgttgaggccaccctggac
tttcccgaagaagaaatcgacttcctcgaaaaataccaggcgcgcgaaacgctgacgggc
atccaggatgaccttcgtgccctcacccggcaggcgcggcaaggcatgatattgcgcgaa
ggcttgcacgttgtattggccgggcaacccaatgtcggcaaatccagcctgctcaatgca
ctggccggcgacgatatcgccatcgtgacccccatcgccggcaccacccgcgacaaagtc
attcagcaaattcacatccagggagtccccatccatatcgtggacaccgccggactgcgc
gacaccgacgacacggttgaaagcataggcatagcccgcagctgggcggaaatcgaaaaa
gccgacgtcatcattcatttgcaggacgcgcgcagccgcagcgacgcgctggacgttgcc
attaccagccgcctgccggcacgcacgcccgttctggaagtgctgaataaaaccgatctg
ctggaccggcttccaggcgccaacgatctttcaagcgtggggtccggacaagtcggcagc
caggactccgacacacccggcgaccacggcacgcatcgcgcgtccagccagccagccatc
gcgatatcggccaaaaccggcgccggcctcgatgtgctgcgacagaaactgcttgatatc
gccggctggaaccccggcaccgaatcgccctggctggcccgcgaacgtcatttgcacgca
ctgcagcgggccgacgaacatcttgccgcggccgccgaatacgccagccacaacgaccag
gtgctggacctgttcgccgaagaactgcggctgacgcacgatgccctgtgttcaattacc
ggccaattcaccagcgacgatctgctgggcgagattttctccagtttttgtattgggaag
tga
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