Paralcaligenes sp. KSB-10: LSG25_16325
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Entry
LSG25_16325 CDS
T07761
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
park
Paralcaligenes sp. KSB-10
Brite
KEGG Orthology (KO) [BR:
park00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
park03016
]
LSG25_16325
Enzymes [BR:
park01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LSG25_16325
Transfer RNA biogenesis [BR:
park03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LSG25_16325
Prokaryotic type
LSG25_16325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UHL63588
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Position
3562941..3563834
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AA seq
297 aa
AA seq
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MKITMLGTGAALPDPDRAQSSILVTLDNGRNYLFDCGEGSTRQMVRANINPADVGWVFIS
HLHYDHVCGLPFFVLSSWVFNREGRLKVYGPRGTQDFVDHSFENGAFKVDIQARASYGVR
QKNIEAVRPLVTEVSPGLIYQDEDVKIYVDLVDHIPTEITDCFGIRLEAEGKVVAFSGDT
KPCESMIRLAKDADLLIHECTFPESFLAHRAKSGVGTYAHTSPLELGKIATQANVQALVA
THFGHYDSTSPVIKRAAANHLPVDLMGPDMLDEVVRDLRKNYKGSIRLAHDLMRIDL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcactatgcttggcacgggtgcggcgctacccgatcccgatagggcgcaatcg
tcgattctggtcaccctggataatggccggaattatctgttcgactgcggcgaaggttca
acgcgccagatggtgcgggccaatatcaatcccgccgacgtgggctgggtattcatcagc
cacttgcattacgatcatgtctgcggcctgcccttttttgtcttgtccagctgggtgttc
aaccgcgaaggccggcttaaagtgtacgggccgcgcggtacacaggacttcgtcgaccat
tcgtttgaaaacggcgccttcaaggtcgatatccaggctcgtgcctcttatggcgtgcga
cagaagaatatcgaggcggtgcgtccgctggtaaccgaggtcagtcctggcctgatctac
caggacgaagacgtcaagatttacgtcgatctcgttgaccatatccccacggaaattacc
gattgcttcggcattcgcctggaagccgagggcaaggtcgtggctttcagcggcgacacc
aagccgtgcgagtccatgatacggctggccaaggatgccgacctgctgatccacgaatgc
acctttcccgagtcgttcctggcgcatcgggctaaatccggggtcggcacctacgcacac
acgagccctttggaattagggaaaattgccacgcaagccaatgtgcaggcactcgttgcc
acccatttcgggcattacgactccaccagcccggtgatcaagcgggcggcagcgaatcac
ctgcccgtggacttgatgggcccggacatgcttgatgaagttgtgcgggacttgcgcaag
aactacaagggatcgatacggctggcccatgatttgatgcggatcgatttatag
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