Paralcaligenes sp. KSB-10: LSG25_16620
Help
Entry
LSG25_16620 CDS
T07761
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LSG25_16620 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
park03021
]
LSG25_16620 (rpoA)
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_16620 (rpoA)
Enzymes [BR:
park01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LSG25_16620 (rpoA)
Transcription machinery [BR:
park03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LSG25_16620 (rpoA)
DNA repair and recombination proteins [BR:
park03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LSG25_16620 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
AAA_lid_4
Motif
Other DBs
NCBI-ProteinID:
UHL63645
LinkDB
All DBs
Position
3615364..3616350
Genome browser
AA seq
328 aa
AA seq
DB search
MSSQGFLKPRSIEVVPVGKNHAKVVMEPFERGYGHTLGNALRRILLSSMAGYAPTEVQMT
GVVHEYSTLAGVREDVVDILLNLKGVVFKLHNREEVALVLRKQGQGVVLASDIELPHDVE
IINPDHVIATLTDAGKLEMQIKVEQGRGYVPGNVRALADDRTHTIGRIVLDASYSPVRRV
SYAVESARVEQRTDLDKLVLDIETNGVVSPEEAVRQSARILMDQISVFAALEGAGDSYEA
PTRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcaaggttttttgaagccccgctctattgaagtggtccccgtaggcaagaat
cacgcgaaagtcgtgatggagccgttcgaacgcggttatggccacacgctgggcaacgcg
ctgcgccgcattctgctgtcgtcgatggcgggctatgcgcccaccgaagtccagatgacg
ggcgtggttcacgaatactccaccctggccggtgtgcgggaagatgtcgtcgatattctc
ctgaatctgaaaggcgtggtcttcaagctgcataatcgtgaagaagtcgccttggttttg
cgcaaacaagggcagggcgtggttctggcaagcgatatcgagttgcctcacgacgttgaa
atcatcaaccccgatcacgtcatcgccacactgaccgatgccggcaaactcgaaatgcaa
atcaaggtcgagcagggccgtggctacgttccgggcaatgtgcgcgcactggccgacgac
cgtacccataccattggccggattgtgctcgatgcttcgtacagcccggttcgccgcgtc
agttacgctgttgaaagcgcgcgtgtagagcagcgtaccgacctggacaagctggtgctc
gatatcgagaccaacggtgtggtatcgcccgaagaagccgtgcgtcaatcggcccgcatc
ctgatggatcagatttcggttttcgcggcgctcgagggtgctggcgattcctacgaagct
ccaacccgcggcacgccgcagatcgatcctgtattgttgcgtccggtcgacgacctggag
ttgacggttcgttccgccaactgcctgaaggccgaaaacatttactacatcggcgacctg
atccagcgtaccgaaaacgaattgctcaaaacgccgaacctgggccgcaagtccttgaac
gaaatcaaggaagtgcttgccgcgcgcggcttgactctgggcatgaagctcgaaaactgg
cctccgcttggcctcgaacgcccttaa
DBGET
integrated database retrieval system
