Paralcaligenes sp. KSB-10: LSG25_17360
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Entry
LSG25_17360 CDS
T07761
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
park
Paralcaligenes sp. KSB-10
Brite
KEGG Orthology (KO) [BR:
park00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
park03021
]
LSG25_17360 (rpoH)
Transcription machinery [BR:
park03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LSG25_17360 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
HTH_AsnC-type
HTH_28
UCR_14kD
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
UHL63784
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Position
3793717..3794601
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AA seq
294 aa
AA seq
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MTQNSQSLALSNSTLAMAISNPGALGTIEAYISAVNRLPLLTQEQEVALGQRLRDDSDLD
AARQLIISHLRLVVSVSRQYLGYGLAHADLIQEGNVGLMKAVKRFDPDRGVRLVSFAVHW
IKAEIHEYIVRNWRLVKVATTKAQRKLFFNLRKMRPDGQTLDTEQVSAIARELNVRPEDV
SEMEVRLSGREMALDGQSDDEDAYAPIAYLSDDGQQEPSRVLERRAHDTLHGAGLTGALD
GLDARSRRIVEARWLQDEGGATLHELAAEFGVSAERVRQIEAAAFKKMRVALTA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaactcgcaatctttggccttgtccaactccactttggccatggctatttcc
aacccaggtgctttaggcacgatcgaagcctatatcagcgccgtcaatcgcctgcccttg
ctcactcaagagcaggaagtggctttgggtcagcgtttgcgtgacgactccgacctcgat
gccgcccgtcaactgattatttcgcatttgcggctggtcgtgtccgtgtcgcgccagtat
ctgggctatggcctggcgcatgccgatcttatccaggaaggcaatgtgggcctcatgaag
gccgtcaagcgcttcgaccccgatcgcggggtgcgcctggtgtcgtttgccgtgcactgg
atcaaggctgaaatccacgaatatatcgtgcgcaactggcgtctggtcaaggtggcaacc
accaaggctcagcgcaagctgtttttcaatttgcgcaagatgcgtcccgacggacaaacg
ctcgatactgaacaggtcagcgccattgcccgtgaactcaacgttcgccccgaagacgtc
agcgagatggaagtccggctttcgggccgtgaaatggcgctcgatggccaaagcgacgac
gaagatgcgtacgcacccattgcctatctgtcggatgacgggcagcaagaaccttcgcgg
gtacttgagcgccgcgcacacgataccctgcatggcgcgggcctgaccggcgcactcgat
ggcctggatgcccgctcgcgccgtatcgtcgaagcgcgctggttgcaggacgaaggcggt
gcgacgctgcatgaactggctgccgagttcggtgtgtcggccgagcgcgtgcggcaaatc
gaagccgccgcttttaaaaaaatgcgtgtggccctgacggcttga
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