Paralcaligenes sp. KSB-10: LSG25_17635
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Entry
LSG25_17635 CDS
T07761
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSG25_17635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_17635
Enzymes [BR:
park01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LSG25_17635
DNA repair and recombination proteins [BR:
park03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSG25_17635
Prokaryotic type
LSG25_17635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UHL66413
LinkDB
All DBs
Position
complement(3849405..3850250)
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AA seq
281 aa
AA seq
DB search
MLPSNQVATDPASMPNTLDPALAQNTLDSPLLTHLQNLDEVWKETLRMPEPKAALRQLSA
FLAARLAAGAEIYPRYPFHALDYVQPDTVRVVILGQDPYHGPNQAQGLAFSVPDTCPCPP
SLQNMFKELALEYPGFDGARNRNAGKTQNNKPSGSTGMGHDLSPWAEQGVLLLNTVLTVE
ARQPASHARQGWEAVTDALISRVARSPQPKVFMLWGSHAQAKRQLLPSNGPHLVLASNHP
SPLSALRPPKPFIGCNHFKLANEWLAQQGQPPIDWTGTAAA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccagcaaccaggtcgcgacggaccccgcaagcatgcccaatacccttgatccc
gccctagcgcaaaacacgctggacagtccactgctgacccatctgcaaaacctggacgag
gtctggaaggaaaccctgcgcatgcccgagcccaaggccgccttgcggcaattgtcggca
tttctggccgcccggcttgccgcgggcgcggaaatctacccacgctatcctttccacgcg
ctcgattacgtacaacccgatacggtccgggtcgtcatcctgggacaagacccctaccac
ggcccgaaccaggcgcaaggtctggcgttttcggtgcccgatacctgcccgtgcccgccc
agcctgcaaaacatgttcaaagaactggctctcgaatacccgggcttcgatggtgcccgc
aaccgcaatgcaggcaagacccagaacaataaaccatctggttctacgggaatgggccac
gacctgtcgccctgggccgagcagggtgtgctgctgctgaatacggttctgaccgttgag
gcgcgccaaccggcttcgcacgccaggcaagggtgggaagccgtgaccgacgccctcatc
agccgcgtggcccgcagcccgcagcccaaggtattcatgctctgggggtcgcatgcgcaa
gccaagcggcagcttctacccagcaatggaccccacctggtcctcgcgtccaaccacccc
tcgcctctatcggccctgcggccgcccaagccgttcataggctgcaatcatttcaagctg
gccaatgaatggctggcccagcaaggccagcctcccatcgactggacaggaaccgccgca
gcgtag
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