Paralcaligenes sp. KSB-10: LSG25_19370
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Entry
LSG25_19370 CDS
T07761
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSG25_19370 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_19370 (mutM)
Enzymes [BR:
park01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LSG25_19370 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LSG25_19370 (mutM)
DNA repair and recombination proteins [BR:
park03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSG25_19370 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_SprT
NFACT_N
Auto_anti-p27
C1_2
Zn_ribbon_TFIIB
DUF5817
Motif
Other DBs
NCBI-ProteinID:
UHL64145
LinkDB
All DBs
Position
complement(4242671..4243498)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIATVMPGRILTRFIVHESRMRWPIPPGLPEIISGKVVQSCERRGKYL
LINFDHGTQIVHLGMSGSLRRVTLDEPRRKHDHAEWLFESARFLLHDPRRFGAVLWHGAE
DGPLAGHPLLAKLGIEPFDPLFSPDWLHRHLRGKTLSIKQALLAGNAVVGVGNIYASESL
FKARINPQTSAGKLSLTRCTRLFASIRQTLEDALASGGSTLRDYVDASGEPGAYFALHAA
VYERAGQPCPVCQTPIRRIVQGQRATYYCPRCQRN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctaccagaagtcgaaacgacccgtcgcggaattgcgacggttatgccgggt
cggatactgacccgattcattgtgcacgaatcgcgcatgcgctggccgatcccgcccgga
ctgcccgaaatcatcagcggcaaggtcgtgcaaagttgcgaacgccgcggcaaatacctg
ctgatcaactttgaccatggtacacagattgtccacctgggcatgtccggctcattgcgg
cgcgtgacgctcgatgagccccggcgcaagcacgatcacgccgaatggctgtttgaaagc
gcgcgctttctattgcacgacccgcgccgcttcggcgcggtgctgtggcatggcgctgaa
gacgggcccctggccggccaccccctgcttgccaagctgggcatagaacccttcgaccct
ctgttcagccctgactggctgcatcgacatctgcgcggcaagacgctttcaatcaaacag
gcattgctggcgggcaatgccgtcgtcggcgtgggcaacatctacgcctcggagtcgctg
ttcaaggcgcgcatcaatccgcaaaccagcgccggcaaactgtccctgactcgctgcacg
cgactgttcgcctctatacggcaaacgctggaagatgcgctcgcgtccggcggcagcacc
ttgcgcgactacgtcgacgccagcggcgagccgggagcttatttcgcactgcacgcagcc
gtttacgagcgtgccggccagccttgccccgtctgccagacacccatacgccgcattgtc
caagggcaaagagcgacttattactgtccgcgctgtcagcgcaattag
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