Pectobacterium araliae: PEC302110_03050
Help
Entry
PEC302110_03050 CDS
T10257
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
parl Pectobacterium araliae
Pathway
parl00040
Pentose and glucuronate interconversions
parl01100
Metabolic pathways
parl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PEC302110_03050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PEC302110_03050
Enzymes [BR:
parl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PEC302110_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BES83208
UniProt:
A0AAN0MJ43
LinkDB
All DBs
Position
complement(350377..351504)
Genome browser
AA seq
375 aa
AA seq
DB search
MKYLLPTAATGLLLLAAQPAMAANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAQVD
SKGKKVKGGAYPLIITYNGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITIQGTNGS
SANFGVWIVNSSNVVVRNMRFGYMPGGAQDGDAIRIDNSPNVWIDHNEIFAKNFECAGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGSSSSDTTARNLTYHHNIYRDVNSR
LPLQRGGLVHAYNNLYDGITGSGFNVRQKGKALIESNWFENALNPVTARNDSSNFGTWDL
RNNNVMSPADFAKYKITWGKPSSPHVNADDWKTTGKFPTVSYKYTPVSAQCVKDKLANYS
GAGKNLAVLTAANCK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctattgcctacggcagccactggattgttattactcgctgctcagccagcg
atggccgccaatacgggcggctatgccaccaccgatggtggcgatgtttctggcgccgtg
aaaaaaacggcacgttctctgcaagagattgtagatattattgaagccgcgcaagtggac
tcaaaaggcaagaaagtcaaaggcggtgcttacccgctcatcatcacctataacggtaat
gaagattcattaatcaaagcggccgaaaagaatatctgcggccagtggagtaaggacgct
cgcggcgtacaaatcaaagaattcaccaaaggcattactattcagggcactaatggctca
tccgccaacttcggtgtctggattgtgaactcttcgaatgtcgtggtacgtaacatgcgc
tttggctatatgccgggcggcgcgcaagacggcgatgctattcgtatcgataactccccg
aacgtctggatcgaccacaacgagatctttgccaagaactttgaatgcgccggtacgcca
gacaatgacaccacctttgaatcagcggttgatatcaagaaagggtcaaccaacgtcacg
gtgtcctacaactacatccacggcatcaaaaaagtcggtctgagcggttcaagtagttcg
gatacgacggctcgtaacctgacttaccatcataatatctatcgcgatgttaattcacgt
ctgccgctacagcgtggtggcctggttcacgcctacaacaacctgtatgacggcatcact
ggctctggctttaacgttcgtcagaaagggaaagccctcatcgaaagcaactggttcgaa
aatgcgctgaacccagtgacagcacgtaacgacagttccaactttggtacctgggatctg
cgtaataacaatgtcatgagcccagccgacttcgctaaatacaaaatcacctggggcaaa
ccgtcctcccctcacgtcaatgcggatgactggaagactacaggaaaattccctaccgtc
tcctataagtacactccagtttcggcgcagtgtgtgaaggataaactggcaaactattct
ggcgcaggtaaaaacctggcagtactgacagccgctaactgcaagtaa
DBGET
integrated database retrieval system
