Pectobacterium araliae: PEC302110_03060
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Entry
PEC302110_03060 CDS
T10257
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
parl Pectobacterium araliae
Pathway
parl00040
Pentose and glucuronate interconversions
parl01100
Metabolic pathways
parl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PEC302110_03060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PEC302110_03060
Enzymes [BR:
parl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PEC302110_03060
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BES83209
UniProt:
A0AAN0KKD2
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Position
complement(352052..353176)
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAKKD
SSGKAVKGGAYPLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGVTILGTNGS
SANFGIWIVNSSNVVVRNMRFGYMPGGAKDGDAIRIDNSPNVWIDHNEIFAKNFECAGTP
DNDTTFESAVDIKKASTNVTVSYNYIHGVKKVGLSGSSNTDTGRNLTYHHNIYSDVNSRL
PLQRGGQVHAYNNLYDGIKSSGFNVRQKGIALIESNWFENALNPVTARNDDSNFGTWELR
NNNITSPSDFAKYNITWGKPSTPHINADDWKSTGKFPAVPYSYSPVSAQCVKDKLASYAG
VGKNQAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctggactattgctgcttgcagcccaaccaaca
atggcggcaaatacgggaggttatgccaccactgacggcggcgacgtttccggtgctgtg
aaaaaaaccgcacgctctctgcaagagatcgtcgatatcattgaagctgcgaaaaaagac
tcaagcggtaaggcggtcaagggtggagcctacccgctcgtgattacctacaacggtaat
gaagatgcgctgatcaaagccgccgaagctaacatctgcggacagtggagcaaagatcca
cgcggtgtggaaatcaaagagttcaccaagggggtcactatccttggaaccaacggttct
tccgctaatttcgggatctggatcgtgaactcttctaacgtcgtggtgcgtaatatgcgc
ttcggctatatgccgggtggcgcgaaagatggcgatgctatccgtattgataactcaccg
aacgtctggatcgatcacaacgaaattttcgcgaaaaactttgaatgtgctggtacgcca
gataacgacaccacgtttgaatcggctgtcgatatcaagaaagcatcaaccaacgtcacg
gtgtcgtacaattatatccatggcgtgaaaaaggtaggtttgagtggttccagcaacacg
gatacgggtcgtaatctgacttaccatcacaatatttacagcgatgttaactcacgtctg
ccgctgcaacgtggtggccaggtgcatgcttataacaacctgtatgacggcatcaaaagt
tcaggctttaacgtccgtcagaaagggatcgcactgatcgaaagcaactggttcgaaaat
gcgctcaacccagtgaccgcacgtaatgacgattccaacttcggtacttgggaactccgt
aacaacaacattaccagcccatctgattttgctaaatacaacatcacctggggtaaaccg
tccacaccgcacatcaatgcagatgactggaaaagcacaggcaaattccctgccgtcccg
tatagctattcccctgtttccgcacagtgcgtgaaggataaactggcgagctatgctggc
gtaggtaaaaaccaggccgtattgacagccgccaactgtaaataa
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