Pectobacterium araliae: PEC302110_06260
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Entry
PEC302110_06260 CDS
T10257
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
parl Pectobacterium araliae
Pathway
parl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PEC302110_06260 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parl03019
]
PEC302110_06260 (pnp)
03016 Transfer RNA biogenesis [BR:
parl03016
]
PEC302110_06260 (pnp)
Enzymes [BR:
parl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PEC302110_06260 (pnp)
Messenger RNA biogenesis [BR:
parl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PEC302110_06260 (pnp)
Transfer RNA biogenesis [BR:
parl03016
]
Prokaryotic type
tRNA degradation factors
PEC302110_06260 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
DUF4172
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
BES83529
UniProt:
A0AAN0KEP9
LinkDB
All DBs
Position
707527..709647
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AA seq
706 aa
AA seq
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MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFSGPIGAARVGYLNDQYVLNPTTDELKESRLDLVVA
GTQGAVLMVESEAEVLSEDQMLGAVVFGHDQQQIVIENINSLVAEAGKPKWEWHAPEVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVNVIKADVVAALQAEDETLNAGEIQEILGNI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQTIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANAPTQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaagtttcaatatggtcagcataccgtcacgttagagacc
ggtatgatggcacgccaggctaccgccgcagtaatggtaagcatggatgacaccgcggta
tttgttaccgttgtcggcgctaaaaacgctaaacccggccaaagtttcttcccgttgacg
gttaactaccaagagcgtacctacgctgctggacgtttccctggtggtttcttccgccgt
gaaggtcgcccaagtgaaggcgaaacgctaatttctcgtctgattgaccgtccgattcgc
cctctgttcccagaaggcttcctgaatgaagttcaggtgattgcgactgtcgtttccgtt
aacccacaggttaaccctgacatcgttgccatgattggtgcctctgcggcactgagcctg
tccggtatcccgttcagcggccctatcggtgcggcgcgcgtcggctacctgaacgaccag
tatgtcctgaatccaaccacagatgagctgaaagaaagccgtttagatctggttgttgca
ggtacgcaaggcgcggttctgatggtggaatctgaagctgaagtactcagtgaagatcag
atgctgggtgcggtagtgtttggtcatgaccaacagcagatcgtgatcgaaaacattaat
tctctggttgctgaagctggcaaaccgaagtgggaatggcatgcgccagaagttaatgtt
tctttagagcagcgcgtacaggctctgtctgaagcacgtttaggtgacgcttaccgcatt
accgaaaaacaagagcgctatgcacaagttaatgtcatcaaagctgatgttgttgctgcg
ctgcaagcggaagatgaaacgctgaatgcgggtgagatccaggaaatcctgggcaacatt
gaaaaaaatgttgtgcgtagccgcgtactggctggcgaaccgcgtatcgatggccgtgaa
aaagacatgattcgtggtctggatgtacgtactggcgtactgccgcgtacccacggttcc
gcgctgttcacccgtggtgaaacgcaggctctagtcactgcaacattgggtactgagcgt
gacgcgcagactatcgatgaactgactggtgaacgtaccgatcgcttcctgctgcactat
aacttccctccgtactctgtcggtgaaaccggtatggttggctcgcctaagcgtcgtgaa
attggtcacggacgtttggccaagcgcggcgtactggcagttatgccgaaggcgaacgag
ttcccgtacaccgtacgtgtggtatctgaaatcacagaatctaacggttcttcttccatg
gcgtctgtctgcggtgcttctctggcattgatggatgctggtgtaccgatcaaatcagct
gttgcgggtatcgcgatgggtctggtgaaggaaggcgacaactttgttgttctgtccgac
atcctaggtgacgaagaccacctgggtgatatggacttcaaagttgctggtagccgtgaa
ggtatcaccgcgctgcaaatggatatcaagatcgaagggattacccgtgagatcatgcag
gttgctttgaatcaagccaaaggtgcgcgtttgcacattctgggtgtgatggagcaggca
atcagcacgccgcgtggcgatatctccgaattcgcaccgcgtattcataccatcaaaatc
agcaccgataagatcaaagatgtgatcggtaaaggtggttcagtgatccgtgctctgacc
gaagaaacaggcacgacgatcgaaatcgaagacgatggtacagtgaagatcgcttcaact
gacggcgaaaaagcaaaacatgcgattcgtcgtattgaagaaatcactgccgagatcgaa
gttggccgcgtgtatcagggtaaagttacccgtatcgttgattttggtgctttcgtcgct
attggcggcggtaaagaaggcctggtgcatatttctcagatcgccgacaagcgtgtagag
aaagtgactgactacctgcaaatggggcaggaagtgccagtcaaggttctggaagttgat
cgtcagggccgcgtgcgcttgagcatcaaagaagccaatgcgccaactcaggaagcggca
gccccgtcttctgaggaataa
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