Pectobacterium araliae: PEC302110_09360
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Entry
PEC302110_09360 CDS
T10257
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
parl Pectobacterium araliae
Pathway
parl03030
DNA replication
parl03430
Mismatch repair
parl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PEC302110_09360 (dnaE)
03430 Mismatch repair
PEC302110_09360 (dnaE)
03440 Homologous recombination
PEC302110_09360 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parl03032
]
PEC302110_09360 (dnaE)
03400 DNA repair and recombination proteins [BR:
parl03400
]
PEC302110_09360 (dnaE)
Enzymes [BR:
parl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PEC302110_09360 (dnaE)
DNA replication proteins [BR:
parl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PEC302110_09360 (dnaE)
DNA repair and recombination proteins [BR:
parl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PEC302110_09360 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BES83839
UniProt:
A0AAN0KL31
LinkDB
All DBs
Position
1054582..1058064
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GIKPIIGADFYVQSDELGDELAHLTVLAMNNQGYQNLTLLISHAYQRGYGAAGPTIDRDW
LVEHQEGLILLSGGRRGDVGQFLLRGNQTQAEQCLAFYQEHFPQRYYLELIRTSRPDEES
YLHAAVELATKHGIPVVATNEVCFISTDDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGEMSTADFLVQCSKKGL
EDRLEFLFPDPEVRAERRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDKVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDSEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKQGQEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGVNGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLADALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPITQYIKEIERYAGGVRLKDMHPTDRGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPAD
ALLNELRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctagccaaagtcggtccgctggtaaaaaaagcggcggcacttggcatgccagcgctggcg
attaccgattttaccaacctgtgtgggctggtaaaattctatggcggcgcgcatggcgcg
ggaatcaagcccattatcggcgcagatttctatgtccaaagcgacgaattgggtgatgag
ttggcgcatctcactgtgctagccatgaacaatcaaggctatcagaatctcacgctgttg
atttcccacgcttatcaacgtggttatggtgctgccggaccgacaattgaccgggattgg
ctggttgagcaccaggaagggctgattttactgtctggcggccgccggggtgatgtcggt
caatttttgctgcgcggtaaccagacgcaggccgaacagtgtctggccttctatcaggaa
cacttcccccagcgttactatctggaattgatccgcacgtcccgccccgatgaagaaagc
tatttgcatgccgccgtcgagctggcgacgaagcacgggatacccgtggtggcgactaat
gaagtgtgctttatcagcaccgatgattttgatgcccacgaaatccgcgtagcgattcac
gatggctacacgcttgatgatcccaaacgtccacgtaattatagcccgcagcaatacatg
cgttccgaagaggaaatgtgcgagctgtttgctgacatccccgaagcgttggcgaacagt
gttgaaatcgccaagcgctgtaatgtaacgatccgtttgggcgaatattttcttccgcag
ttcccgacgggtgagatgagcaccgcagattttctggttcagtgttcgaaaaaagggttg
gaggatcgtcttgaattcctgttccctgacccggaagtacgcgctgagcgtcgaccggaa
tatgatgaacgtctggacatcgaactgggcgtcatcaaccaaatggggttcccgggctac
ttcctgatcgtcatggaatttatccagtggtcgaaggataacgatgtgcctgttggccca
ggacgtggctccggtgcgggttcattggtcgcctacgcgctgaaaatcaccgatctagac
ccgctagagttcgacctgctgtttgaacgcttcctcaaccctgaacgcgtctcgatgcct
gactttgacgtcgatttctgcatggaaaaacgcgacaaggttatcgatcacgttgcggaa
atgtacgggcgtgatgcagtttctcagattatcacctttggtacgatggcggcgaaagcg
gttattcgtgacgtaggacgtgtactcggacacccctatgggtttgtcgatcgcatttca
aaactggtgccgcccgatcccggtatgacgttggagaaggcgtttgccgccgaaccgcaa
ttgccggaaatttatgaagccgatgaggaagttaaggctctcatcgatatggcacgaaag
ctcgaaggggtgacgcgtaacgctggtaagcatgcgggtggggtggtgatatccccgacc
aaaataaccgattttgcgccgctgtattgcgattcggaagggaatcacccggttacccag
tttgataagaacgatgtggaatatgctggtctggtgaagttcgacttccttggcttacgt
acattgaccatcatcgactgggcgctggagatgatcaacgcccgccgtgcgaagcaaggt
caggaaccgattgatatcgccgcgatcccactcgacgataagaaaagtttcgacatgctg
caacgctcggaaaccaccgcggtattccagcttgaatcgcgtggcatgaaagatctgatt
aagcgtctgaagcccgactgttttgaagatatgatcgcactggtggccttgttccgtccc
ggcccgctgcaatccggcatggtggataacttcatcgaccgtaagcatgggcgtgaagcg
atttcgtaccctgatatcgagtggcagcacgagtcgctcaagcccgtgttggagccgacc
tacggtattatcctgtatcaggaacaggtgatgcagatcgcacaggttctggcgggctat
acgctgggcggtgcggatatgttgcgtcgtgcgatggggaaaaagaacccagtcgagatg
gcgaagcagcgcggcggttttgaagatggcgctaaatcgcgcggcgtgaacggtgagttg
gcggttaagattttcgacctggtggaaaaattcgccggttacggctttaataaatctcac
tctgcggcttatgcgttggtgtcttaccaaacgctgtggctgaaagcgcactatccggct
gaattcatggcggcggtaatgacggccgatatggataacacggataaagtcgtagggctg
gttgatgaatgctggcggatggggttaaaaatcctgccaccggacatcaacagcggtctg
taccactttcacgttaacgatgatggcgagattgtttatggtatcggcgccattaaaggc
gtaggtgaaggcccgattgaggcgattatcgaagcgcgtaatcagggcggctattttagg
gagctgtttgacctctgcgcccgtaccgatattaaaaagctgaaccgtcgcgtgctggaa
aagctgatcatgtccggggcgttcgatcgtctggggccgcatcgcgctgcgctgatgaat
tcattggctgacgcgctgaaggctgccgatcagcatgcgaaagccgaagccatcggtcag
gtggatatgtttggcgtgctggccgatgcgcctgaacaggttgagcaatcttacagcacc
gtaccaccgtggccggagcaggtggtgttggatggtgagcgggaaacgctgggactgtac
ctgaccggccacccgatcacgcaatatattaaggaaattgaacgctatgccggtggcgtg
cgtttgaaagatatgcacccgacggatcggggcaaaatgaccactgccgttgggctggtg
ttagcggctcgcgtcatggttaccaaacggggaaaccgtattggtgtctgtacgctggac
gatcggtccggtcggcttgagatcatgttgtttaccgatgcattggaaaaatatcagcat
ttacttgagaaagaccgtatccttatcgccagtggacaggtcagctttgatgacttcagt
ggcgggcttaaaatgaccgtccgagagttaatggatatcagtgaagcgcgggaaaaatac
gcgcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaacctcatcgatcggggacgatcccagtgcatctctattaccag
cgtgaagatgcgcgtgcccgactacgtttcggcgcagcatggcgtgtaacgcctgccgat
gcgctactgaacgagctgcgcacattagtgggtaatgagcaggtggaactggaatttgac
taa
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