Pectobacterium araliae: PEC302110_11680
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Entry
PEC302110_11680 CDS
T10257
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
parl Pectobacterium araliae
Pathway
parl00550
Peptidoglycan biosynthesis
parl01100
Metabolic pathways
parl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PEC302110_11680 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PEC302110_11680 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parl01011
]
PEC302110_11680 (mrdA)
Enzymes [BR:
parl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PEC302110_11680 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
parl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PEC302110_11680 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BES84071
UniProt:
A0AAN0KDN6
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All DBs
Position
complement(1330066..1331970)
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AA seq
634 aa
AA seq
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MKVERKPFRDYTAESALFVRRALVAFLGILLLSGVLVVNLYHLQILRVDDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELVPDKVDNLKETLEALRPIVNLTDDDLENF
EKERKRSRRFTSIPVKTGLDEIQVARFAVNQYRFPGVEVKGYQRRYYPYGSALTHVTGYV
SKINDKDVERLTKEEKIADYAATRDIGKLGIERHYEDLLHGKPGYEEVEVNNRGRVIRQL
HEQPPQAGRDIYLTLDLSLQIYIEKLLEGSRAAVIVTDPRDGGILAMVSTPSYDPNLFVD
GISTKNYTKLQNDPNRPLINRATQGIYPPASTVKPYIAVSALTAGVITTNTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNLTKSLEESADTFFYQVAYDMGIDRLSEWMNKFGYGEKTGI
DISEESAGNMPTREWKLRRFKKPWYQGDTIPVGIGQGYWTATPIQMNKALVTLINDGQVK
TPHLLYSSRENGAIVPFRQTENQQIGNIHSGYWEVAKDGMYGVANRANGTAHKSFDDAPY
KIAAKSGTAQVFGLKENETYNAHKIAEHLRDHKLMVAFAPYKDPKVAMSIILENGGAGPT
VGVITRQILDHILLGDNNTDLPSAPPAPPGSESE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagaacgcaaaccctttcgtgattatacggcggagtccgctctgttcgtgcgc
cgtgctttggtagccttcctgggcattttgctgctttctggtgtattagtcgttaatctt
tatcatctgcaaattttgcgtgtcgatgactatcgcactcgctctaacgaaaaccgtatt
aagctggttcctatcgcgcccagccgcggcattatctacgatcgtaatggcacgccgctg
gcgttgaaccgcaccatttaccaattagaactggtgcctgacaaagtcgacaacctgaaa
gaaacgttggaagcgctacgtcccatcgttaatttgaccgatgacgatctggaaaatttt
gaaaaagaacgcaagcgttcacgccgttttacctccattccagtaaaaactgggcttgat
gagattcaggtcgcccgttttgccgtcaaccaataccgctttcctggcgtggaagttaaa
ggttatcaacgccgctattacccttacggttctgcgttaacgcatgtcacgggctatgtc
tccaaaattaacgataaagacgtagaacggctgaccaaagaagaaaaaattgccgattac
gccgccacgcgtgatattggcaagctcggtatcgaacgtcattacgaagacctgctgcac
ggcaaacccggttatgaagaagttgaagtgaacaaccgcggccgcgtgatccgccaactc
cacgaacagcccccgcaggctgggcgtgatatttatctaacgttggatctgagcctacaa
atctacatcgagaaactgctggaaggtagccgcgccgccgtcattgtcaccgatccacgc
gacggcggtattctggcgatggtttccacgcccagttacgaccccaatctgtttgtcgac
gggatttccaccaaaaattataccaaactacaaaacgatcccaatcgtccattgatcaat
cgtgcaacgcagggcatttatcctccggcctccaccgttaaaccctatatcgcggtttcc
gccctgacggctggcgttatcaccactaacactagcctgtttgatcctggctggtggcaa
ttacccggctccgaaaagcgcttccgcgactggaaaaaatggggacatggccgtcttaac
ctcaccaaatcactggaagaatctgcggataccttcttctatcaggtcgcttatgacatg
ggaatcgatcgcctatctgaatggatgaataaatttggttatggcgagaaaaccggcatt
gatatttcggaagaaagcgctggcaacatgccaacccgtgagtggaaactcaggcgattt
aagaaaccctggtatcagggagatacgatccccgtcgggattggccaaggctactggacg
gcaacacctatccagatgaataaggcactggtcacgctcatcaacgacggccaggtcaaa
acgccacacctgctttatagctcacgggaaaatggcgctatcgtgcctttccgacagact
gagaatcagcagattggcaatatccactctggctattgggaagtggcgaaggacgggatg
tatggcgtagcgaatcgcgctaacggcaccgcacacaagagtttcgatgatgcaccctat
aagatcgcggcaaaatccggtacggcgcaggttttcggcctgaaagaaaacgaaacctat
aatgcgcataagatcgcagagcatctgcgtgaccataaattaatggtcgcctttgccccg
tataaggatccaaaagtcgcgatgtcgattattctggaaaacggtggggcgggtccgacc
gtgggcgttatcactcgccagatccttgatcatatcctgctgggtgataacaataccgat
ttacccagcgcgccgcctgcgccgccgggtagcgagagtgagtaa
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