Pectobacterium araliae: PEC302110_16670
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Entry
PEC302110_16670 CDS
T10257
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
parl Pectobacterium araliae
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parl03009
]
PEC302110_16670 (rimO)
Enzymes [BR:
parl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PEC302110_16670 (rimO)
Ribosome biogenesis [BR:
parl03009
]
Prokaryotic type
ribosomal protein modification factors
PEC302110_16670 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
BES84570
UniProt:
A0AAN0ML25
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Position
complement(1876778..1878091)
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AA seq
437 aa
AA seq
DB search
MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLKEAKLDRVGCFKFSPVDGASANAFPDQVPEEVKEERFHRFM
QLQQAISTQRLQDKIGRDVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVKVGDIV
KVKIEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccacgtatcggctttgtttccctcggttgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttatcaggtcgtgccacgttatgacgac
gctgaactggtgatcgtcaatacctgtggttttattgacagcgccgtacaagagtcgctg
gaagccatcggcgaagcactgaatgaaaacggcaaagtcatcgtgacgggctgtctgggt
gccaaagaaaaccaaatacgcgaagtgcatcccaaagttctggaaattaccggcccgcat
agctacgagcaagtgctgtcgcacgtgcatcaatatgtcccaaaaccgacgcacaatccg
tttaccagcctggttcccgagcagggcgtaaaactcacgccgcgccattacgcctatctg
aaaatttcagaaggctgtaaccaccgctgtacgttctgcatcatcccttccatgcgtggc
gatctcgatagccgtccaatcggttcggtactggatgaagcgaaacgtctggttgatgct
ggcgtaaaagaactgctggtgatttctcaggatacgtcggcatacggcgcagatgtgaag
caacgcactggcttttggaacggacaaccggtcaaaaccagtatggtcagcctgtgtgaa
caactggcgtcgctaggcgtgtgggtgcgtctgcattacgtctacccttacccgcacgta
gacgatgtgatcccgctaatggctgaaggcaaaatcctgccttatctggatattccgctc
cagcacgctagcccgaaaatcctcaagctgatgaagcgtcccggtgcggtagaaagaacg
ttggagcgcattaaacgctggcgcgaaatttgcccagacttaacgctgcgttcaaccttt
attgtcggcttccccggcgaaacggaagaagatttccagatgctgctcgatttcctgaaa
gaagccaaacttgatcgcgtgggctgtttcaaattcagcccagtcgacggtgcttcggca
aatgcatttcccgatcaggtaccggaagaggttaaagaagaacgtttccaccgcttcatg
caattgcagcaggcgatttccacccagcgtttgcaggacaaaattggtcgtgacgtgctg
gtgctgatcgatgaaatcgatgaagaaggtgccattggccgtagcatggccgatgcccct
gaaattgacggtgccgtttacctgaacggcgaaactggcgtgaaagtcggtgacatcgtc
aaagtgaaaatcgagcacgcagacgaatacgatctgtggggtagccgggtttaa
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