Pectobacterium araliae: PEC302110_17310
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Entry
PEC302110_17310 CDS
T10257
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
parl Pectobacterium araliae
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parl03032
]
PEC302110_17310 (ihfB)
03036 Chromosome and associated proteins [BR:
parl03036
]
PEC302110_17310 (ihfB)
03400 DNA repair and recombination proteins [BR:
parl03400
]
PEC302110_17310 (ihfB)
DNA replication proteins [BR:
parl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PEC302110_17310 (ihfB)
Chromosome and associated proteins [BR:
parl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PEC302110_17310 (ihfB)
DNA repair and recombination proteins [BR:
parl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PEC302110_17310 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BES84634
UniProt:
A0AAN0KM15
LinkDB
All DBs
Position
1949478..1949762
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHIPAKVVEDAVKEMLEQMASTLAEGDRIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaaggcttgctggacagcaatctcatatcccggccaaa
gtggttgaggatgcagtgaaagaaatgctcgaacaaatggcctctacgttagccgaaggc
gaccgtattgaaatccgtgggtttggcagtttttcacttcactaccgtgcaccgcgtgta
ggtcgtaatccgaaaacgggtgacaaagttgagttggaaggtaagtacgtccctcacttt
aaaccgggcaaggaactccgcgaccgcgctaatatttacggctaa
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