Pectobacterium araliae: PEC302110_17690
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Entry
PEC302110_17690 CDS
T10257
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
parl Pectobacterium araliae
Pathway
parl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PEC302110_17690 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parl02000
]
PEC302110_17690 (msbA)
Enzymes [BR:
parl01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PEC302110_17690 (msbA)
Transporters [BR:
parl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PEC302110_17690 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
DEAD
DUF87
AAA_22
AAA_16
SLFN-g3_helicase
APS_kinase
AAA_29
RsgA_GTPase
AAA_30
AAA_25
ABC_membrane_2
AAA_18
MMR_HSR1
AAA_15
nSTAND3
Activator-TraM
G-alpha
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BES84672
UniProt:
A0AAN0KJQ1
LinkDB
All DBs
Position
1992059..1993843
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AA seq
594 aa
AA seq
DB search
MVGYFFPIQVHYMLNDKDLSTWQTFRRLWPMISPFKAGLAAAAIALIINAAGDTLMLSLL
KPLLDEGFGKAERSVLLWMPLVVIGLMLVRGLSGFVSSYCVAWVSGKVVMNMRRRLFSHI
MGMPVAFFDQQSTGTLLSRITYDSEQVAASSSGALITVVREGASIIGLFILMFYYSWQLS
IILIVIAPIVSIAMRLVSKRFRNISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETK
RFDQVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVF
SSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDMEQERDTGKLEIERAKGDLEFRQVN
FAYPGRENLALKNINLHVPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLR
EYRLSSLRNQVALVSQNVHLFNDTIANNIAYARNEHYSREEIERAAKMAYATDFINKMEN
GLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK
DRTALVIAHRLSTIEKADEILVVEDGRIIERGNHTALLTANGAYAQLHRMQFGE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtcggctatttcttcccgattcaggttcactacatgctgaatgataaagatctctcc
acctggcagacctttcgccgcctatggccgatgatctctccttttaaggcagggcttgct
gctgctgcaatcgcactcattattaatgcggctggcgatacattaatgctctctctgctt
aaacccttgctggatgaaggattcggtaaggcggaacgttcagtattgctctggatgccg
ttggttgtcattgggctgatgttagtgagggggctgtcgggctttgtctccagctactgt
gttgcctgggtttcaggcaaagtggtgatgaatatgcgccgccgccttttttcccacatc
atggggatgccggtagcgtttttcgaccaacagtcgacggggacgctgctatcgcgtatc
acctatgattctgagcaggttgcggcttcgtcatctggcgcgttgattaccgtcgtcagg
gaaggggcgtcaattattggcctgtttattctgatgttctactacagttggcagttgtcc
atcatcctgattgtgattgcgccgattgtgtcgatcgctatgcgactggtgtccaaacgg
ttccgtaatatcagtaaaaacatgcaggacaccatgggacacgtcaccaccagcacggag
caaatgctgaaagggcataaagaagtgttgatgtttgggggccaggacgttgaaactaaa
cgtttcgatcaggtcagtaaccggatgcgtcagcagggtatgaagatggtgtctgcgtct
tcaatttccgaccctatcatccaactgatcgcatcgctggcgttggcgtttgtcttgtat
gctgccagtttccctagcgtgatggagacattgactgccgggacgatcacggtggtgttc
tcttctatgatcgcgctaatgcgtccgttaaagtcactcactaacgtgaatgctcagttc
caacgtggtatggcggcgtgccagacgttgttcgccattctggacatggaacaggagcgt
gatactggcaaattggaaatcgaacgagcgaaaggtgacctcgaattccgtcaggttaat
ttcgcttatccaggacgagaaaatctggcgctgaaaaatatcaatctgcatgttcccgtt
ggtaaaacggtggcattggttggccgctctggttcaggtaaatcgacaattgccagtttg
atcacccgtttttacgatattcagtctggtgaaattttacttgatggtcacgacttacgc
gaatatcgcctatcttccttacgcaatcaggtggcgctggtttctcagaatgtgcaccta
tttaacgatacgatagcgaacaatatcgcctatgcccgcaatgagcactatagccgtgag
gaaattgagcgtgcggcaaaaatggcgtatgcgaccgatttcatcaacaagatggaaaat
gggctggacacggtgattggtgaaaatggtgtgatgctctcaggtgggcaacgccaacgg
atcgcaattgcccgtgcgctactgcgtgatagcccgatcctgatattagatgaggccacg
tcagcgttggataccgaatctgaacgtgcgattcaggctgcattagatgagttgcagaaa
gatcgtactgcattggtcattgcacaccgcctttccacgattgaaaaagcagatgagatt
ctggtcgttgaagacggcagaatcattgagcgtggtaaccatactgcgctactgacggcg
aacggtgcctatgcgcagttgcatagaatgcagtttggcgaatga
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