Pectobacterium araliae: PEC302110_24010
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Entry
PEC302110_24010 CDS
T10257
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
parl Pectobacterium araliae
Pathway
parl03030
DNA replication
parl03430
Mismatch repair
parl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PEC302110_24010 (holB)
03430 Mismatch repair
PEC302110_24010 (holB)
03440 Homologous recombination
PEC302110_24010 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parl03032
]
PEC302110_24010 (holB)
03400 DNA repair and recombination proteins [BR:
parl03400
]
PEC302110_24010 (holB)
Enzymes [BR:
parl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PEC302110_24010 (holB)
DNA replication proteins [BR:
parl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PEC302110_24010 (holB)
DNA repair and recombination proteins [BR:
parl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PEC302110_24010 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
BES85304
UniProt:
A0AAN0KB67
LinkDB
All DBs
Position
complement(2711409..2712419)
Genome browser
AA seq
336 aa
AA seq
DB search
MEWYPWLNASYRQLIGQYQAGRGHHAVLLHALPGMGDESLTYALSRWLICQRPDGMKSCG
QCHSCNLMTAGTHPDWHVLSPEKGKHSLGVDPVRDVVEKVYQHSRQGGAKVIWLASAEQL
TEAAANALLKTLEEPPQNTFFLFGCREPARLLATLRSRCLYHYLDVPNETQSVLWLNARH
RHDSKALRTALRLQSGAPLAAEALLQPERWKQRSGLCQTFSAALTSRDLLSLIPQLNHDD
ADTRIHWLAALLLDAMKWQQGASEHLVNQDQIELIERLAREPSTHLQYELQQWLACRQKL
LTITGVNRELLLTERLLDGERTLASSVKRDSHPFSI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagtggtatccgtggctgaatgcctcttatcggcagcttatcggtcaatatcaggca
ggtagaggccaccatgcggtgttgctgcatgcgctgccgggcatgggtgatgaatcgctg
acttatgcgctgagtcgttggctgatctgtcagcgacctgacggcatgaaaagttgcggc
cagtgccactcttgtaacctgatgacagcgggaacgcacccggactggcatgtgctgagc
ccggagaagggcaagcacagtctgggggtcgatccggtgcgtgacgtcgtggaaaaagtg
tatcaacactcccgacaaggcggagcaaaagtgatctggctggcttccgctgagcaactg
accgaagccgcagcgaacgcattgctgaaaacgctggaagaaccgccgcaaaataccttc
tttttatttggctgccgggaacccgcgcggttgttagcaaccttacgcagccgttgcttg
taccactatctggatgtccctaatgagacgcagagcgtgctgtggctgaatgcgcgccat
cgccatgatagcaaggcattacgcacggcattgagattgcaatcgggtgcgccgctcgct
gccgaagcattattgcagccagagcgctggaaacagcgtagcgggctatgccagacattt
tctgctgcactgacttcacgggatctgctttcattgataccgcaactgaatcatgacgac
gcggatacacgtattcactggctggccgcattactgctggatgccatgaaatggcagcag
ggtgctagcgaacatcttgtgaatcaggatcagattgagctgattgagcgtttggcgcgc
gaaccttccacacatttgcagtatgaactgcaacagtggctggcgtgtcgacaaaaattg
ctgactattacgggtgttaatcgtgagttattgctgacggaacgcttgcttgatggcgaa
cgcacgctggcttcgtcggttaagcgtgacagccatcccttttctatttaa
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