Pectobacterium araliae: PEC302110_25770
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Entry
PEC302110_25770 CDS
T10257
Symbol
nirB_2
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
parl Pectobacterium araliae
Pathway
parl00910
Nitrogen metabolism
parl01100
Metabolic pathways
parl01120
Microbial metabolism in diverse environments
parl01310
Nitrogen cycle
Module
parl_M00531
Assimilatory nitrate reduction, nitrate => ammonia
parl_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PEC302110_25770 (nirB_2)
Enzymes [BR:
parl01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
PEC302110_25770 (nirB_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
Rubredoxin_C
NIR_SIR
Fer2_BFD
NIR_SIR_ferr
DAO
Pyr_redox_3
GIDA
NAD_binding_8
AlaDh_PNT_C
FAD_binding_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BES85480
UniProt:
A0AAN0KD67
LinkDB
All DBs
Position
complement(2885908..2890104)
Genome browser
AA seq
1398 aa
AA seq
DB search
MMKPHLIVIGNGMASARFVNVLRQLAATRFRITVIGDEPRASYNRILLSPVLSGEKAFTD
TLLTPAALDDDAALPVNYLLGERVIHIDRQQREVTTTQRQLHYDHLVLATGSTPFMPPMP
GIDLAGVCGFRTLDDVELMLATIRQSVPAVVIGGGLLGIEAAAALQLRGADVTLLHRVPV
LMERQLDATASDLLCDSLRERGIACETDVQVVALYGDERGVTAVALGDDRTIPAGLVVVT
AGVIPASQLARECGLPCNRGVLVDGQLQTADPYISAIGECCELNGEIFGLVAPCFAQATL
VAQRLAGHTPADYQREQAATRLKVTGIGVVSGGDINVTPDDEVYTLFDPQTQHYRRLLVR
DGRLSGVLLYGDTDDSQRLLAAMDSATEGEMIPPASLLFGLSSPDSDPQPEAVRIPVMSK
PILVVVGHGMVGHYFLEQLVERDLHQHYHIVVFGEERHEAYDRVHLSEYFSGRSAASLSL
VKDGFFAESGIELRSASEIVAIDRERQCVCDAQGRETAYDKLVLATGSYAFVPPIPGNTR
PGCLVYRTLDDLDAIAAQAKKGKSGVVIGGGLLGLEAANALRQLGLDTHVVEFAPRLMAV
QLDDGGATMLRRKIEALGVQIHLSKETREITDGEQAVHRLCFADGSVLETDLVLFSAGIR
PRDKLADSCDLDLEKGPRGGIVIDDRCQTSDDAIFAIGECALWKGQIFGLVAPGYQMARS
VADTLAQRDTPFTGADMSTKLKLLGVEVASIGDAHGRTAGSQSYQWTDGPNEVYKKIVVS
ADGKRLLGAVLIGDSSDYSTLLQMMLNGMPLPTQPEGLILPARSGDAPKGLGVAALPASA
QICSCHNVSKGDISAAVAGGCGELGALKTCTKAGTGCGGCVPLLKQVMEYELTQLGVEVK
KDICEHFAYSRQELYHLIRVHEIRSFDSLLERYGHGLGCEVCKPLVGSMLASCWNDYLLQ
PQHLPLQDTNDRFFANIQKDGTYSVVPRVPAGEITPEGLIAIGQVAQRYNLYTKITGGQR
VDLFGARLEQLPEIWRELIDAGFETGHAYGKSLRTVKSCVGSTWCRYGVQDSTGLAIQLE
HRYKGLRSPHKVKMAVSGCTRECAEAQSKDIGVIATDKGWNLYVCGNGGMKPRHADLFAS
DLDMETLLRTIDRVLMFYIRTGDRLQRTSTWMDNLEGGIDYLRQVILEDSLNIGEELDKE
MQRVVDAYQCEWQTTLESPERLALFRGFLNSDSPDEAVVMVPERGQIRPAQDHEKAVSPE
PAVLKPAAHEAEWVQVATLGDIPRHAGMAARLGQQQIALFHLPGSEQQVYALENHEPGSG
ANVLSRGLLGDVAGEPVVISPLYKKRFKLRDGVSPDDSGLYVRAWPVRVEDDEIWVCRQP
LAVPESVSLAETAMAKAS
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaccgcatctgattgtgattggtaacgggatggcgagtgcgcgattcgtcaat
gtgctgcgccaactggccgcaacgcgcttccgaatcaccgtgattggcgatgaaccgcgc
gccagctataaccgcatcctgctgtcgccggtattgagcggcgaaaaagcgtttacggat
acgctgctgacgccagcggctctcgacgacgatgcggcgctgccggtcaattatctgctg
ggtgagcgggtaatccatatcgatcgccagcagcgtgaggtgacaaccacgcaacggcaa
ctgcattacgatcatctggtattggcgaccggttccacgccgtttatgccgccgatgccg
ggtatcgatctggcgggcgtgtgcggcttccgcacgctggatgatgtcgagctgatgttg
gcgacgattcgccagtccgttcctgcggtggtgattggcggcggtttgctcggtattgaa
gccgccgcggcgctgcaactgcgcggtgccgacgtcacgttgctgcatcgtgttccggtt
ctgatggagcgtcaactggatgccacggcgagtgacctactgtgcgacagcctgcgcgaa
cgcggcattgcctgcgagacggatgtgcaggttgtggcgctgtatggcgatgagcgcggg
gtgacggcggtcgcactgggcgatgaccgaacgattccggcggggctggtggtggtgacg
gcgggcgtgattcctgccagtcaactggcgcgggaatgcggcttgccctgcaaccgtggc
gtactggtggatggacagttgcaaaccgccgacccgtatatcagcgcgatcggtgaatgc
tgtgaactcaatggcgaaatatttgggctggttgccccgtgtttcgcccaggccacgctg
gtggcacagcgccttgccggacatacaccggcagactaccagcgtgagcaggcggcgacg
cgactgaaggtcaccggtattggtgtggtcagcggcggcgatattaacgttacaccggat
gatgaggtgtacaccctttttgatccgcagacgcagcactaccgtcgtctgctcgttcgc
gacggtcggctgagcggagtcctgctgtatggcgacactgacgacagccagcgcctgctg
gccgcgatggatagcgcgacagaaggcgagatgattccgcctgcctcgctgcttttcggc
ctttcttcccctgattctgacccacagcctgaagctgtaaggatccctgtcatgagcaaa
cctattttggtggtcgtcggccacggtatggtcggccactattttcttgaacagctggtt
gaacgcgacctgcatcagcattaccacatcgtcgtattcggcgaagaacgccatgaagct
tatgaccgcgttcacctctccgagtatttctccggccgcagtgccgcttcgctgtcgctg
gtaaaagacggcttttttgccgagagcggcattgagctgcgcagtgccagcgagatcgtg
gctatcgatcgtgaacgtcagtgcgtgtgtgatgcgcagggcagagaaaccgcctacgac
aaactggtgctggcgacggggtcttatgcctttgttccgccgattcccggcaacacgcgc
cccggctgtctggtgtatcgcacgctggacgatctggatgcgattgcagcacaggcgaaa
aagggcaagtctggcgtggtgattggcggcggcctgctggggctggaagccgcaaacgcc
ttgcgtcaactggggctggacacgcatgtggtggagtttgctccgcgtctgatggcggta
cagctggatgacggcggtgccaccatgttgcgccgcaagattgaagcgctgggcgtacag
attcatctcagcaaagaaacgcgggaaatcaccgacggcgagcaagcggtgcatcgcctc
tgctttgctgacggcagcgtgctggaaaccgatctggtactgttttccgccgggattcgc
ccgcgcgacaaactggcagatagctgcgatttagatttagagaaagggccgcgcggcggc
attgtgattgacgaccgctgccagacttccgatgacgcgattttcgccatcggcgagtgt
gcgctgtggaaagggcaaattttcgggctggtggcaccgggctaccagatggcacgcagc
gtggcggatacgctggcgcagcgcgatacgccatttactggcgcggacatgagcaccaag
ctgaaattgttgggcgtagaagtcgcctcgattggcgatgctcatgggcgcacggcggga
agccaaagctaccagtggacggacggcccgaacgaggtctacaagaaaattgtcgtgtct
gccgacggtaagcgtttactgggtgctgtattgatcggcgacagcagtgattacagcacg
ctgttgcaaatgatgctcaacggtatgccgttgcctacacagccggaaggattgattttg
cccgcgcgttccggtgatgcgccgaaaggattgggcgtggcggcattacccgccagcgca
cagatttgctcctgccataacgtcagcaaaggcgatatctcggcggcggtggcgggcggc
tgcggcgaactgggtgcgctgaaaacctgcaccaaagcggggacgggctgcggtggctgt
gtgccgttgcttaaacaggtgatggagtacgaactgacgcagctgggcgtcgaagtgaag
aaggacatttgtgagcatttcgcctattcacgtcaggagctgtatcacctgatccgcgtg
catgagatccgctcgttcgacagtctccttgagcgttacggccacggtttgggctgcgaa
gtgtgtaagccactggtgggatcaatgctggcctcctgctggaatgactacctgctgcaa
ccgcagcacctgccgttgcaggataccaacgatcgtttctttgccaacatccagaaagat
ggcacctattccgttgtaccgcgcgttccggcgggggagatcacgccagaaggcctgatc
gctatcggtcaggttgcgcagcgctataacctgtacaccaagatcactggcggccagcgg
gtggatttattcggtgctcgcttagagcagcttccagagatctggcgtgagctgatcgat
gccggattcgaaaccggccatgcctacggtaaatcgctgcgtaccgtgaaatcctgcgtg
ggctcgacctggtgccgctacggcgtgcaggattccaccgggctggcgatccaactggag
catcgttacaaggggctgcgctcgccgcacaaagtcaaaatggcggtgtccggctgtacc
cgtgaatgtgcggaggctcaaagcaaagacatcggcgtgattgccaccgataaaggctgg
aatctgtacgtgtgcggcaatggtggcatgaaaccgcgtcatgcggatctcttcgccagc
gatctggatatggaaaccctgctgcgcaccatcgatcgggtgttgatgttttatatccgc
accggcgatcgcctccagcgcaccagcacctggatggataatctggagggcggtatcgac
tatctgcgtcaggtgattctggaagacagcctgaacatcggcgaagagttagataaagag
atgcagcgcgtggtggatgcctaccagtgcgaatggcaaaccacgctggaaagcccggaa
cgcctggcgctgttccgcggcttcctgaatagcgatagtccggatgaagcggtggtgatg
gtgccggagcgtgggcagatccgtccggcacaggatcatgagaaagcggtatcgccagaa
cccgcggtgctaaaacccgccgcgcatgaagcggagtgggtgcaggtcgcgacgctgggc
gatattccgcgtcatgctggcatggcggcgcgcctcggacagcagcagatcgcgctgttc
cacctaccgggtagcgagcagcaggtgtacgcgttagaaaaccacgaaccgggcagtggg
gcgaacgtgctgtcgcgtgggctactgggtgacgtggcgggtgagccagtcgtgatttct
ccgctgtacaaaaaacgcttcaagctgcgggatggcgtcagcccggatgacagcgggctg
tacgtacgtgcgtggccggtgcgcgtggaagatgatgaaatctgggtatgccgtcaaccg
ctggccgtgcctgaaagcgtctcgctggcagagacggctatggcgaaagcatcatga
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