Pectobacterium araliae: PEC302110_26940
Help
Entry
PEC302110_26940 CDS
T10257
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
parl Pectobacterium araliae
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parl03009
]
PEC302110_26940 (dbpA)
Enzymes [BR:
parl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PEC302110_26940 (dbpA)
Ribosome biogenesis [BR:
parl03009
]
Prokaryotic type
rRNA helicases
PEC302110_26940 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BES85597
UniProt:
A0AAN0KBC5
LinkDB
All DBs
Position
complement(3012062..3013444)
Genome browser
AA seq
460 aa
AA seq
DB search
MSTTSFSSLALPAEQLSNLNELGYTDMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGI
GLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSL
VHAPHIVVGTPGRIQDHLRKQSLSLDSLKVLVLDEADRMLDMGFTDAIDDVISYMPSDRQ
TLLFSATYPEEIEQISARVQRQPQRFEIADDVKESAIEQRFYETTKEQRLPLLIAILSHY
QPASCVVFCNTKRDCQSVFDALDMRGISVSALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELALVVNFELAFDPEVHVHRIGRTGRAGTQGLAVSLCTPQEMNRANLIEDY
LGMRIKWTPVDEISRSGDVALEPEMMTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPLHAYVAIRKASAKRALQQLQKGKIKGKSCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacaacctctttttcttccctcgcgctgccggcagagcagttatccaatcttaac
gaactgggctataccgacatgacgccagttcaggcggcgacgttgccagccgttctgagc
ggcgcggacgtacgggccaaggcgaaaaccggtagcggtaaaacggcggcatttggtatt
ggcctgctggatcgtatcgtcgtgagcgactttaccacgcaggcactggtgctgtgcccg
acgcgtgaactggcggatcaggtcagcaaagagctgcgtcgtctggcgcgttttgcgcaa
aacattaagattcttacgctatgcggtggtcagccgatgggtcagcagctcgactcgctg
gttcacgcaccacatatcgtcgtcgggacaccagggcgtattcaggatcatttacgcaag
cagtcactgtctctggatagcctgaaagtgctggtgctggatgaagcggatcgcatgctg
gacatgggctttactgacgcgattgatgatgtgatttcctatatgccgtccgatcgtcaa
accctactcttttccgccacgtacccggaagagatcgagcagatcagcgcacgtgttcag
cgtcagccgcaacgtttcgagattgcagatgatgtgaaagagtcggccattgaacaacgt
ttctatgagacgacgaaagaacaacgcctgccgctgttgattgctattctgagccattac
cagccagcatcctgcgtggtgttctgcaacacgaagcgtgattgtcagagcgtatttgat
gcgctggacatgcgcgggattagtgtatcggcgctgcatggcgatctggaacagcgcgat
cgcgatcaggtgctggtacgttttgctaatcgcagttgccgtgtgttggttgcaaccgat
gttgcggctcgcggcctcgatatcaaagagctggcgctggtggtgaattttgagctggct
ttcgatcctgaagtccacgttcatcgtattggcagaaccggccgcgcgggtacgcagggg
ctggctgtcagcctatgcacgccacaggaaatgaatcgtgctaatctgattgaagactat
cttggtatgcgcattaaatggacgccggtggatgagattagccgcagtggtgacgttgcg
ctcgaacctgagatgatgacgttgtgcattgatggcggcagaaaagctaaaatccgcccc
ggcgatattctcggcgcgttaacgggtgatgcgggattaactgcggcagaagtcgggaaa
attgatatgtttcctttgcatgcttatgtggctattcgtaaagccagcgctaaacgtgcc
ttgcaacagctccagaaaggcaaaatcaaagggaaaagctgtaaggccagattgttaaag
taa
DBGET
integrated database retrieval system
