Pectobacterium araliae: PEC302110_31120
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Entry
PEC302110_31120 CDS
T10257
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
parl Pectobacterium araliae
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parl03021
]
PEC302110_31120 (rpoS)
Transcription machinery [BR:
parl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PEC302110_31120 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BES86015
UniProt:
A0AAN0KCH7
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All DBs
Position
complement(3508044..3509036)
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AA seq
330 aa
AA seq
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MSQSTLKVNELHEDTDFEENGLDVFDDKALAEEDTNDSDSAEDELLSQGVPQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDIPSRRRMIESNLRLVVKIARRYNNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQVQGLSIEELFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtacgctgaaagttaacgagttacatgaagataccgatttcgaagaaaat
ggacttgacgtttttgacgataaagcgctggcagaggaagataccaatgatagtgactcg
gcggaagacgagctgttatcgcaaggggtcccacagcgtgttctcgacgcaacgcaactc
tatttgggagagatcggctattcgccgcttttaaccgcagaagaagaagtttattttgca
cgacgcgcgctgcgtggtgatatcccatcgcgtcgccgaatgatcgagagtaacctgcgg
ctggtagtgaaaattgcccgccgttacaacaatcgtggtctggcgctgctggatttgatt
gaagagggaaatcttggtctgatccgtgcggttgaaaaattcgatccagaaagagggttc
cgtttttcaacctacgcgacgtggtggattcgacagacgatagagcgggcgattatgaat
caaacccgcaccatccgcttgcctattcacattgtcaaagaactcaacgtttatctgcgc
accgcgcgcgaattgtctcataaactggatcacgagccgagtgcggaagaaattgccgaa
cagcttgataagcccgttgatgacgtcaaccgcatgctgcgcttgaatgagcgtattact
tccgtcgataccccgttagggggtgattcggaaaaagcgctgctggatattctggcagac
gaaaaagataacggacctgaagacaccacacaggataacgatatgaagcagaatatcgtt
aaatggttgtttgagcttaatgccaaacagcgtgaggtgttggcgcgtcgtttcggccta
ttagggtatgaagcggctacgctggaagatgtgggtcgtgaaatcggcttaacgcgtgaa
cgtgttcgtcagattcaggttgaaggtttacgccgcctgcgggaaattttgcaggttcag
ggcttgagcattgaagaactgtttcgtgaataa
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