Candidatus Profftella armatura (Diaphorina cf. continua): PADco_2490
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Entry
PADco_2490 CDS
T11131
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
parm Candidatus Profftella armatura (Diaphorina cf. continua)
Pathway
parm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PADco_2490 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parm03400
]
PADco_2490 (sbcB)
Enzymes [BR:
parm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
PADco_2490 (sbcB)
DNA repair and recombination proteins [BR:
parm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PADco_2490 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PADco_2490 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PADco_2490 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_C
ExoI_SH3
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BCG49669
UniProt:
A0A7R7ACQ2
LinkDB
All DBs
Position
328566..330014
Genome browser
AA seq
482 aa
AA seq
DB search
MIDGNSTFLWYDYETFGLNVRRDRPFQFAAIRTDIMLNEIDNPIMLYCKPAPDFLPNPKA
CLITKITPQFCLNNGIPEYKFASIIESIFLKPGTISVGYNTISFDDEVTRFMFWRNLINP
YEREWKNNCSRWDLINVIRASYVLRPYGIIWPYKNNGKPSLKLEHLSFVNNLLHKKSHDA
LSDVRATLGLARLIRNNNPRLFNFALSLRKKKYVLMEIGWPIARPFFYISHAFSAKNDYI
SLMWPICIHPMNKNILITWNLLYDPKQFLLNDINKIRDYLCFKKNSLNEDIIPISMIHLN
RSPIVISNLKILSSNLIFRCKFDLNCAFKNIKYASSILSRTHIWKKIFLDYKINNSNLEL
NIDEELYNNFISKNDNLKLAILRSMSPQELSDVNFCFENKKLKELIFRYRARNFIETLSL
KELKRWEKYRISRFYNKKNNNYTINMFYLEIQSLLKKVNEYDKKILNALLMYGKNIIPKY
GY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatagatggaaattctacttttctttggtatgattatgaaacatttggtttaaatgtt
cgaagagataggccatttcagtttgctgcaattagaactgatattatgcttaatgaaatt
gataatccaattatgttatattgtaaaccggctcctgattttttgcctaatccaaaggct
tgtttaattacaaaaattactcctcaattttgtttaaataatggtataccagagtataaa
tttgcatctattattgaaagtatttttttaaaaccaggtacgattagtgttggttataat
acaatttcatttgatgatgaagttactcgatttatgttttggagaaatttaattaatccc
tatgaaagagaatggaaaaataattgcagtcgctgggatttaattaacgtaataagagct
tcttatgtattacgtccatatggaataatatggccatataaaaataatggtaaaccaagt
ttaaaattagagcatttaagttttgttaataatttattacataaaaaatcgcatgacgcc
ttatcagatgttcgtgctacattaggtttagctagattaatacgtaataataatcctaga
ttgtttaattttgctttatcattacgaaaaaaaaaatatgttttaatggagatagggtgg
ccaatagctcgtccatttttttatatttctcatgcattttctgctaaaaatgattatatt
tctcttatgtggcctatttgtatacatccaatgaataaaaatatattaattacttggaat
ttattatatgatcctaaacaatttttattaaatgatattaataaaattcgcgattattta
tgttttaaaaagaattccttaaatgaagatattataccaataagtatgattcatttaaat
agatcaccaatagtgataagtaatttaaaaatattatcatcaaatttaatatttcgctgt
aaatttgatttaaattgtgcttttaaaaatataaaatatgcctcatctatattgagtaga
actcatatttggaaaaaaatttttttagattataaaattaataattctaatttagaatta
aatattgatgaagaattatataataattttattagtaagaatgataatttaaaattagcc
attttaagatctatgtctcctcaagaattatctgatgttaatttttgttttgaaaataaa
aagttaaaagagttaatttttcgttatcgagcaagaaattttatagaaacattatcttta
aaagaattaaagcgctgggagaaatatcgtatttctcgattttataataaaaaaaataat
aattacaccataaatatgttttatttagaaatacaatctttattaaaaaaggtaaatgaa
tatgataaaaaaatattaaatgcattattgatgtatggaaaaaatattatcccaaaatat
ggttattaa
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