Paraconexibacter antarcticus: NBH00_01685
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Entry
NBH00_01685 CDS
T08278
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
parn
Paraconexibacter antarcticus
Pathway
parn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NBH00_01685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parn03019
]
NBH00_01685
03009 Ribosome biogenesis [BR:
parn03009
]
NBH00_01685
Enzymes [BR:
parn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NBH00_01685
Messenger RNA biogenesis [BR:
parn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NBH00_01685
Ribosome biogenesis [BR:
parn03009
]
Prokaryotic type
rRNA helicases
NBH00_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
WSD
Motif
Other DBs
NCBI-ProteinID:
UTI64931
LinkDB
All DBs
Position
complement(321013..323037)
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AA seq
674 aa
AA seq
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MTDASHTPDAPAAPPAAAHNTPTADAPEAAEPAAAEAPDAPAAAESPEAPAAPEPEAPAP
EPEAAEPEPEAAAPEPEAPAPEPEAAEPEPEPTPSAPEPEVTGFAALGLRSELLESLTAL
GYEEPTPIQREAIPPVIAGRDLLGQAATGTGKTAAFALPILHRMPPLGAGTHPAALVLVP
TRELAIQVSEAIHKYGLKIGARVLPIYGGQPMQRQLKALARGVDVVVATPGRALDHINRN
TLKLAGLQMVVLDEADEMLDMGFADDIESILSATPPGRQTVLFSATMPGRIDKMARKHLR
DPVRIQIERERPAAGEGPQVRQSAFIVSRFHKPAALGRILDIESPAAAIVFCRTRDQVDQ
LTDTLNGRGHRAEALHGGMTQEQRDKVMGRLRAGTAELLVATDVAARGLDIDQLTHVVNY
DVPAAAEAYVHRIGRVGRAGREGVAITLAEPREHRMLKTIERVTGQRIGIEKIPTVADLH
ARRLEATRGALHELLTADDLEHARVVVESLTDEFDLMQVALAAVKLAHERAGGFEADDED
EIPQVSIKPERAGGPGGGRPDRGPGGAGGAKPWEKRGPGGPGGPKGGGKGRPTDGRPMTR
IFIGAGRSGNIRPADLVGAITGESHITGRDIGAIQISEKFSLVEVPEGDAEQVIAALRAG
TIKGKKTTVRREKF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcatcccacacccccgacgcccccgccgcacccccggccgccgcgcacaac
acccccaccgccgacgcccccgaagccgccgagcccgccgccgctgaggctcccgacgct
cccgccgccgccgagtcccccgaggctcccgccgcgcccgagcccgaggcccccgcgccc
gagcccgaagccgccgagcccgagccggaagccgccgcgcccgagcccgaggcccccgcg
cctgagccggaggccgccgagcccgagcccgagcccacaccctccgcccccgagcccgag
gtcaccggcttcgccgcgctcggcctgcggtccgagctgctcgagtccctcacggccctc
ggctacgaggagcccacgccgatccagcgcgaggcgatccccccggtcatcgcgggccgc
gacctcctcggccaggcggcgaccggcacgggcaagacggcggcgttcgcgctcccgatc
ctccaccggatgccgccgctcggcgccggcacgcaccccgcggcgctcgtcctcgtcccg
acacgcgagctcgcgatccaggtctccgaggcgatccacaagtacggcctgaagatcggc
gcccgcgtgctgccgatctacggcggccagccgatgcagcgccagctgaaggcgctcgcc
cgcggggtcgacgtcgtcgtcgccacccccggccgcgcgctggaccacatcaaccgcaac
acgctgaagctcgcgggcctgcagatggtcgtgctcgacgaggccgacgagatgctcgac
atgggcttcgcggacgacatcgagtcgatcctctcggcgaccccgcccggccggcagacc
gtcctcttctcggcgacgatgccgggccggatcgacaagatggcccgcaagcacctgcgg
gaccccgtccgcatccagatcgagcgcgagcgccccgctgccggcgaggggccgcaggtc
cgccagagcgcgttcatcgtcagccgcttccacaagccggcggcgctcgggcgcatcctc
gacatcgagtcgccggccgccgcgatcgtcttctgccgcacgcgcgaccaggtcgaccag
ctcaccgacacgctcaacggccgcggccaccgcgccgaggcgctgcacggcggcatgacc
caggagcagcgcgacaaggtcatgggccggctgcgcgccgggaccgcggagctcctcgtc
gcgaccgacgtcgccgcccgcggcctggacatcgaccagctcacgcacgtcgtgaactac
gacgtccccgccgccgccgaggcctacgtccaccgcatcggccgcgtcggccgtgccggg
cgcgagggcgtcgccatcacgctcgccgagccgcgcgagcaccggatgctcaagacgatc
gagcgggtcaccggccagcggatcggcatcgagaagatcccgaccgtcgccgacctccac
gcccgccggctcgaggccacccgcggcgcgctccacgagctgctcaccgccgacgacctc
gagcacgcccgcgtcgtcgtcgagagcctcaccgacgagttcgacctcatgcaggtcgcg
ctcgccgcggtgaagctcgcgcacgagcgcgccggtggcttcgaggccgacgacgaggac
gagatcccgcaggtctcgatcaagcccgagcgcgcgggcgggcccggtggcggccgtccc
gaccgcggaccggggggcgccggcggcgccaagccctgggagaagcgtggcccgggcggc
ccgggcgggccgaagggcggcggcaagggccggccgaccgacgggcgtccgatgacccgg
atcttcatcggcgcgggccggagcggcaacatccgcccggccgacctcgtcggcgcgatc
accggcgagtcccacatcaccggccgcgacatcggcgcgatccagatctccgagaagttc
tcgctcgtcgaggtgccggagggcgacgccgagcaggtcatcgccgccctgcgcgccggg
acgatcaagggcaagaagacgaccgtgcggcgcgagaagttctga
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