Paraconexibacter antarcticus: NBH00_05450
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Entry
NBH00_05450 CDS
T08278
Name
(GenBank) RNA polymerase sigma factor
Organism
parn
Paraconexibacter antarcticus
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma2
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UTI65655
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Position
complement(1079408..1081048)
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AA seq
546 aa
AA seq
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MEASALRAPAALAPRRPAGVLLRLRSDEQLVALFRQGNEDAFRLIHDRYRQRLSAYARQM
LGGSATDADDAMQDVFLRAYAALRADDRPVTLRAWLYRVAHNRCIDHLRRPASQPTVELS
ESARPLPATTGDPILAAERREDLRRLVLDVRALPEQQRSALLMREMEGLSYQELAAALDV
TIPAVKSLLVRARMGLVESQQARDTPCQSIREDIVSAHDRGVRASGRARRHVRECPGCAG
YRATLRGISGGLSALNPSPGPWAAIAKLVGIGAGGSGAAGGAAAAGVGGAAAGVTAGSTG
GAVVAGAAATKLAAVVAAAALVGGSVEVAREQAAPHPREAPAAAAHAAGPRAAAGLPAHT
AAAAAAASALVRPGDRLRPPAGPAVRHRRHVARTATAPGPALPAAPDAVPAVRPAHDGGA
EAPAEDPAGAGTDAGTGLGGLLGALGGSDPASASGPGSASASGGTTGSGETPSTSGTGPA
SGSGSSSGPGSGSGSGSGSSTGSGSTTGTSSGGTTASGAQVTAPATGSGGSGGGAGAPSG
ATPSGS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctcggccctcagagctcccgcagcactcgcgccccggcgccccgccggtgtg
ctgctgcggctgaggagcgacgagcagctcgtcgccctcttccgccagggcaacgaggac
gccttccgcctcatccacgaccgctaccgccagcggctcagcgcctacgcccgccagatg
ctcggcggctccgcgaccgacgcggacgacgcgatgcaggacgtcttcctccgtgcgtac
gccgcgctccgggccgacgaccggccggtgacgcttcgcgcctggctctaccgcgtcgcg
cacaaccggtgcatcgaccacctccggcgcccggcctcgcagccgacggtcgagctctcg
gagtcggcgcggccgctcccggcgacgacgggcgacccgatcctcgccgccgagcgccgc
gaggacctccgccgcctcgtgctcgacgtccgcgccctccccgagcagcagcgttccgcg
ctgctcatgcgcgagatggagggcctgagctaccaggagctcgccgctgcgctcgacgtc
acgatccccgccgtcaagtcgctgctcgtccgcgcgcggatgggcctcgtcgagtcccag
caggcccgcgacacgccgtgccagtcgatccgcgaggacatcgtgtccgcgcacgaccgc
ggcgtccgcgcgagcggccgtgcgcgccgccacgtccgcgagtgcccgggctgcgccggc
taccgggcgacgctccgcggcatcagcggcggcctgagcgcgctgaacccctcgcccggc
ccgtgggccgcgatcgcgaagctcgtcggcatcggggccggcggctccggcgccgccggg
ggcgccgcggccgcgggcgtcggcggcgccgccgccggggtgaccgccggcagcaccggg
ggcgccgtcgtcgcgggtgccgcggcgacgaagctcgcggccgtcgtcgccgccgccgcg
ctcgtcggcggttccgtcgaggtcgcccgcgagcaggccgcgccgcatccgcgcgaggca
cccgcagccgccgcgcacgccgccggcccgcgggccgcggcgggcctgcccgcgcacacc
gcggcggccgccgccgccgcatcggccctcgtccgcccgggcgatcggctgcgcccgccg
gcgggccccgccgtgaggcaccggcgccacgtcgcccgcacggcgaccgcaccggggccc
gccctgccggccgcccccgacgccgtcccggcggtgaggcccgcgcacgacggcggcgcc
gaggcgcccgccgaggacccggccggcgccgggaccgacgcgggcaccgggctcggcggg
ctgctcggcgcgctcggcggcagcgacccggcgtccgcgtcagggccgggctcggcctcc
gcctcgggcggaacgacgggcagcggcgagaccccgtcgacgagcgggaccgggcccgcc
tcgggcagcgggtcctcgtccggaccggggtcgggaagcggcagcggctcgggctccagc
accggctccgggagcaccaccgggacctcgagcggcgggacaaccgcgtcgggagcccag
gtcactgcgccggcgacgggcagcggcggcagcggcggcggggcgggcgccccgtccggc
gcgacgccgtccgggtcctga
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