Paraconexibacter antarcticus: NBH00_13670
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Entry
NBH00_13670 CDS
T08278
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
parn
Paraconexibacter antarcticus
Pathway
parn03030
DNA replication
parn03430
Mismatch repair
parn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NBH00_13670 (holA)
03430 Mismatch repair
NBH00_13670 (holA)
03440 Homologous recombination
NBH00_13670 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parn03032
]
NBH00_13670 (holA)
03400 DNA repair and recombination proteins [BR:
parn03400
]
NBH00_13670 (holA)
Enzymes [BR:
parn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NBH00_13670 (holA)
DNA replication proteins [BR:
parn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NBH00_13670 (holA)
DNA repair and recombination proteins [BR:
parn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NBH00_13670 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UTI62409
LinkDB
All DBs
Position
2782689..2783660
Genome browser
AA seq
323 aa
AA seq
DB search
MPAWRPAFLIHGDDHGRVGERRARLKEMAEAESGSGGVETFEGDGSTPEAIGLALNAMTF
AVGRRFLIVDGVERWKDADVKTHLQATLADMPPETTVAFFAREDGRAKAPAALAAAVKAA
GGSVAAEVMLKGKELPRWAIGEARRLGIDMDPEAARALIDAVGERQQRLLRELEKLALEH
GPGVKLGVDEIEAVAAPSAEQQVWGFVDALVARNQGRAVRSYLELRAQGESVGRLIPLMA
RRVREIETISARLEAGESPAQVKAAVRMPPWMADRRIREAKSTDLEALRTAVITLADLET
SSRGLSELSDDTATLRAILTIAA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcctggagacccgccttcctcatccacggagacgaccacgggcgcgtcggggag
cggcgggcccggctgaaggagatggcggaggccgagtccggctccggcggggtcgagacc
ttcgagggcgacggctccacgcccgaggccatcggccttgcgctcaacgcgatgacgttc
gccgtcggccggcgcttcctcatcgtcgacggcgtcgagcggtggaaggacgcggacgtc
aagacccatctgcaggcgacgctcgccgacatgccgcccgagacgaccgtcgcgttcttc
gcccgcgaggacgggcgggcgaaggctccggccgcgctcgcggccgcggtgaaggcggcg
ggcggctcggtcgcggcggaggtgatgctcaagggcaaggagctgccgcgatgggccatc
ggtgaggcgcggcgcctgggcatcgacatggacccggaagcggcgcgcgcgctcatcgac
gccgtgggcgagcggcagcagcggctcctccgcgagctcgagaagctcgcgctcgagcac
ggccccggggtgaagctcggcgtcgacgagatcgaggcggtcgccgcgccgtcggccgag
cagcaggtctggggcttcgtcgacgcgctcgtcgcgcgcaaccaggggcgagccgtgcgg
tcctacctcgagctgcgggcgcagggcgagtccgtcggccggctcatcccgctcatggcc
cgccgggtgcgcgagatcgagacgatctccgcccgcctggaggccggggagtcgccggcg
caggtgaaggcggcggtgcggatgccgccgtggatggccgaccggcgcatccgcgaggcg
aagtcgaccgacttggaggcgctgcggacggcggtcatcacgctcgccgacctcgagacc
tcgagccgcggcctgtccgagctctccgacgacaccgcgacgctgagggcgatcctgacg
atcgcagcgtga
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