Paraconexibacter antarcticus: NBH00_13905
Help
Entry
NBH00_13905 CDS
T08278
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
parn
Paraconexibacter antarcticus
Pathway
parn03030
DNA replication
parn03410
Base excision repair
parn03420
Nucleotide excision repair
parn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NBH00_13905 (polA)
03410 Base excision repair
NBH00_13905 (polA)
03420 Nucleotide excision repair
NBH00_13905 (polA)
03440 Homologous recombination
NBH00_13905 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parn03032
]
NBH00_13905 (polA)
03400 DNA repair and recombination proteins [BR:
parn03400
]
NBH00_13905 (polA)
Enzymes [BR:
parn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NBH00_13905 (polA)
DNA replication proteins [BR:
parn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NBH00_13905 (polA)
DNA repair and recombination proteins [BR:
parn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NBH00_13905 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NBH00_13905 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UTI62456
LinkDB
All DBs
Position
2829707..2832334
Genome browser
AA seq
875 aa
AA seq
DB search
MADRPDELFLIDGNSLAYRAFFALPESIATSTGQPTNAIFGFASMLVKLLTEYGVKPTIV
VWDAGSSGRKELSADYKAQRTSRPDLLKEQWPHLLEIVEAFGYRNTHVDGYEADDVIASI
AQRAREADPPVRSVVVTGDRDAFQIIDDDGMVAIMATGRGITDTKLYDRQAVIDRYGLAP
ELIPDFYGLKGDTSDNIPGVPGIGDKTGATLLQQFGDLEGVLANVENISGAKRKENLTNH
ADDARLSKQLATIQRDVPVDIDPTHEAAREPDRSKLREVFRRFELRAPLSRLEEALGVPD
PAHPGDGIGEGIPGGTLTGDVQLTARVREATIADLRVLPPGQEVALAVTVPEAPEGELFA
IDAEARFGVSVGDGGVLTGPCADAAEVIAALGDRPVVVHDAKAVGPVPPNLAHDTLLGAY
LLEPARRGYPFAELCEERGLATKIEDPAAATSLLTSALAAWQREQLTERGLESLLHDVEL
PLVGVLASMEAAGMRLDKARLALIKGRVDEEIGQLERDVWELAGEEFVLGSPQQLGHVLF
EKLGLSRKRRGKTGFSTDARVLQAIREEHPVIPKIERWRELNQLSKTYLDVLPHLTDAED
RIHTTFLQAVAQTGRLSSTNPNMQNVPVRTELGREIRGCFRAADGHVLVSADYSQVELRI
LAHVADEPVLKEIFIRGDDVHTATASTVFQKPADQLTPMDRSKAKMINYGIVYGLSDFGL
ADRLNIPREEAKAFIDTYLERFPKVAQFMADTIAQAKEDGHVTTLYGRRRQIPELRARNY
QVRTLGERLAVNTVIQGTAADVMKLAMIEAFRALAASGLAARMILTVHDELVFEAPESEA
DAVAALAVETMTKPWPYEPPLAVDVGYGVSWMDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgacctgacgagctcttcctcatcgacggcaactcgctcgcctaccgggcg
ttcttcgcgctgccggagtcgatcgcgacgtcgaccggccagccgacgaacgcgatcttc
gggttcgcgtcgatgctcgtgaagctcctcaccgagtacggggtgaagccgacgatcgtc
gtgtgggacgccggctcgtccgggcgcaaggagctctcggccgactacaaggcgcagcgc
acgtcccgcccggacctgctgaaggagcagtggccccacctgctcgagatcgtcgaggcg
ttcggctaccgcaacacccacgtcgacggctacgaggcggacgacgtcatcgcgtcgatc
gcgcagcgcgctcgcgaggccgacccgcccgtccgctcggtcgtcgtcaccggtgaccgc
gacgccttccagatcatcgacgacgacgggatggtcgcgatcatggcgaccggtcgcggc
atcacggacacgaagctctacgaccggcaggcggtcatcgaccgctacggcctcgcgccc
gagctcatccccgacttctacgggctcaagggcgacacgagcgacaacatccccggggtc
cccggcatcggcgacaagaccggcgcgacgctcctgcagcagttcggcgacctcgagggc
gtcctcgccaacgtcgagaacatctccggcgccaagcgcaaggagaacctcacgaaccac
gccgacgacgcgcggctctccaagcagctcgcgacgatccagcgcgacgtcccggtcgac
atcgacccgacgcacgaggccgcccgcgagccggaccgctcgaagctgcgcgaggtcttc
cgccgcttcgagctgcgggcgccgctgtcgcggctggaggaggccctcggtgtacccgac
cccgcccaccccggcgacggcatcggcgagggaatccccggcgggacgctcaccggggac
gtgcagctcaccgcgcgggtgcgcgaggcgacgatcgccgatctgcgggtgctcccgccc
ggccaggaggtcgcgctcgcggtcacggtgcccgaggcgccggagggcgagctcttcgcg
atcgacgccgaggcgcggttcggtgtctcggtcggggacggcggggtcctgaccgggccg
tgcgccgacgcggccgaggtcatcgcggcgctcggggaccgcccggtcgtcgtccacgac
gcgaaggcggtcggcccggtcccgccgaacctcgcccacgacacgctcctcggcgcctac
ctgctggagccggcccggcgcgggtacccgttcgccgagctctgcgaggagcgcggcctg
gcgacgaagatcgaggaccccgcggcggccacgtcgctgctgacgagcgcgctcgccgcc
tggcagcgggagcagctcaccgagcgcggcctcgagtccctcctgcacgacgtcgagctg
ccgctcgtcggggtcctcgcctcgatggaggcggcgggcatgcgcctggacaaagcgcgc
ctcgcgctcatcaagggccgcgtcgacgaggagatcgggcagctcgagcgggacgtgtgg
gagctcgcgggggaggagttcgtcctcgggtcgccgcagcagctcggccacgtcctcttc
gagaagctcggcctgtcgcgcaagcggcgcggcaagaccggcttctccaccgacgcccgc
gtcctgcaggcgatccgcgaggagcacccggtcatcccgaagatcgagcgctggcgcgag
ctgaaccagctctccaagacctacctcgacgtcctcccgcacctcaccgacgccgaggac
cgcatccacacgacgttcctgcaggccgtcgcgcagacggggcgcctgtcctcgacgaac
ccgaacatgcagaacgtgccggtgcggaccgagctgggccgcgagatccgcggctgcttc
cgcgccgccgacggccacgtcctcgtgagcgccgactactcccaggtcgagctccggatc
ctcgcgcacgtcgccgacgagccggtcctcaaggagatcttcatccggggcgacgacgtc
cacaccgccaccgcgtcgacggtgttccagaagccggccgaccagctcacgccgatggac
cgctcgaaggcgaagatgatcaactacggcatcgtctacggcctctcggacttcggcctc
gccgaccgcctgaacatcccgcgcgaggaggcgaaggccttcatcgacacgtacctcgag
cgcttcccgaaggtcgcgcagttcatggcggacacgatcgcgcaggcgaaggaggacggc
cacgtcacgacgctctacggccgccgccgccagatcccggagctccgggcccgcaactac
caggtgcgcaccctcggcgagcgcctcgccgtcaacaccgtcatccaggggacggcggcg
gacgtcatgaagctcgcgatgatcgaggccttccgcgccctcgcggcctccggtctcgcc
gcccgcatgatcctcaccgtccacgacgagctcgtcttcgaggcccccgagtccgaggcc
gacgccgtcgccgccctcgccgtcgagacgatgacgaagccctggccctacgagccgccg
ctggcggtcgacgtggggtacggggtgtcgtggatggacgcgaagtag
DBGET
integrated database retrieval system
