Paraconexibacter antarcticus: NBH00_13955
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Entry
NBH00_13955 CDS
T08278
Name
(GenBank) RNA polymerase sigma factor
Organism
parn
Paraconexibacter antarcticus
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma2
PhyR_sigma-like
KORA
Motif
Other DBs
NCBI-ProteinID:
UTI62466
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Position
complement(2845072..2846520)
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AA seq
482 aa
AA seq
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MQPRLLKEPIRLAGQPLLRLQSDERLVRLVQDGHGPAFGTLVDRYRPALLRYCTRLVGEQ
RAEDAVQQTFVNAHRALTEHDVTTTDLRAWLYRIAHNAAVNLLRGEREGWSLDDPAAAGA
TLSRGSDDVADTVERREHLERTLAAISALPAAQRDALVLRELEGRSHAEIAGALGVTAGA
ARQHLMRARAAVRAAAAAATPYPLLTRIAEAMSAGPAGERTAAAAGAGLGAGLAKLSAGL
LAGGALAGGAAVGTGVVPSPLHHRHHAPARVQGAAPAPPAVATDAASAPAPAPATPVPVA
LTAKAPAPHGSSSSHRRGGGRGGRHRSGDDSGDGRTPSHSSSAGSSGSGEDRTSGGGGAS
HGGAGRDDGGSHHSGSTSSSGGSSGSSDDRGSEGSGTPSGGSGSSSEGSGDTATTATTSG
APSTSGGSGSGSSDAFEESPSGSTTTVPLTTSASGTSGSASAAASGSGTSGGSGSSDDGL
DP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccgccttctcaaagagcccatccgcctcgccggtcagccgctgctccgcctg
cagtccgacgagcgtctcgtccgcctcgtccaggacggccacggaccggcgttcggcacg
ctcgtcgatcgctaccgaccggccctgctccggtactgcacgaggctcgtcggcgagcag
cgcgcggaggacgccgtccagcagaccttcgtcaacgcccaccgcgccctgaccgagcac
gacgtcacgacgaccgacctgcgcgcctggctctaccgcatcgcccacaacgccgccgtg
aacctgctccgtggtgaacgcgagggctggtcgctcgacgacccggcggccgcgggcgcg
acgctcagccgcggcagcgacgacgtcgccgacaccgtcgagcgccgcgagcacctcgag
cgcacgctcgccgcgatctccgcgctcccggccgcccagcgcgacgcgctcgtcctccgc
gagctcgaggggcgctcccacgccgagatcgccggcgccctcggggtgacggcgggggcc
gcccgccagcacctcatgcgggcccgggcggccgtgcgcgccgcggccgcggccgccacg
ccctatccgctgctcacccggatcgccgaggccatgagcgccgggcccgccggggagcgc
accgccgcggccgccggggccgggctcggcgccggtctcgcgaagctctcggccggcctg
ctcgccggcggcgccctcgccggcggcgcggcggtcggcaccggcgtcgtgccgtccccc
ctgcaccaccgtcaccacgcgccggcgcgggtccagggcgccgcgcccgcccctccggcg
gtcgccacggacgcggcgagcgcgcccgcgcccgcgcccgcgacccccgtgccggtcgcg
ctcaccgcgaaggccccggcgccgcacggctcgtcgtcctcccaccgccgcggcggcggt
cggggcggccgtcaccgctccggcgacgacagcggcgacggccgcaccccgtcgcactcg
tcctcagcgggctcgtccggatccggcgaggaccgcacctcgggcgggggcggcgcctcg
cacggcggggccgggcgcgacgacggcgggtcgcaccactcgggttcgacctcttcctcc
ggcgggtcctcgggctcctcggacgatcgcggatcggagggctccggcacgccgtcgggt
ggctccggctcctcgtccgagggttcgggcgacaccgccacgacggccacgacctccggc
gccccgtcgacctcgggcggctccggctccggctcgtcggacgccttcgaggagtcccct
tccggcagcaccacgaccgtccccctcaccacctcggcgtcaggcacctcggggtccgcg
tcggccgccgcgtcggggtcgggcacgtccggcggctcaggctcgtcggacgacggtctc
gatccctga
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