Paraconexibacter antarcticus: NBH00_14360
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Entry
NBH00_14360 CDS
T08278
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
parn
Paraconexibacter antarcticus
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parn03016
]
NBH00_14360
Enzymes [BR:
parn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NBH00_14360
Transfer RNA biogenesis [BR:
parn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NBH00_14360
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
UTI62545
LinkDB
All DBs
Position
complement(2931766..2932929)
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AA seq
387 aa
AA seq
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MSADTAAIAARARETGRLGIDTEFMGEGRYRPLLCLVQVVVLDEQGESDVTVLDPLDGPG
FDPAPLAEVLADPAVEIVFHAGRQDVAILRRCWQTTVTNIFDTQVAAGFAGLRAQLGYEP
LLNEVLGVRLQKSASFTKWDARPLSEEQVSYAREDVLHILQVAEKLQERLVGLGRLEWAV
EECRFLESINDDRDLDVLLEKLPRSGGLDPSVRAVARELLAWREDTARESDRPVSGVLQD
AALVEIAKRKPRSMDRLAQIRGLHEGTLRRRGKAIIEAVERGREQPGIPSEVERGPAPSA
DDAPLIALGEALVRTRAAEAEVAYELLAARADLQKIVVAVRDGTPDPPVRTLEGWRREVV
GAELLDLLRGGRSLRVGPGRRIVASEA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgacaccgctgcgatcgccgctcgggcccgggagaccgggcgcctgggcatc
gacaccgagttcatgggcgaagggcgctaccggccgctgctctgcctcgtgcaggtggtc
gtcctcgacgagcagggtgagtccgacgtcaccgtcctggacccgctcgacggccccggt
ttcgaccccgcgcccctcgctgaggtgctcgccgacccggcggtggagatcgtcttccac
gccggccgccaggacgtcgcgatcctccgccgctgctggcagacgacggtcacgaacatc
ttcgacacccaggtcgccgcgggcttcgccggcctgcgcgcgcagctcggctacgagccg
ctgctcaacgaggtcctcggcgtccggctgcagaagtcggcgagcttcacgaaatgggac
gcgcgcccgctctcggaggagcaggtcagctacgcgcgggaggacgtcctccacatcctc
caggtcgccgagaagctccaggagcgcctcgtcggcctcgggcgcctggagtgggcggtc
gaggagtgccgcttcctggagtcgatcaacgacgatcgggacctcgacgtcctgctcgag
aagctgccgcgctcgggcggcctggacccgagcgtccgcgccgtcgcccgtgagctgctc
gcctggcgcgaggacaccgcgcgcgagtccgaccggccggtgtcgggcgtcctgcaggac
gccgcgctcgtcgagatcgccaagcgcaagccgcggtcgatggaccgcctcgcgcagatc
cgcggcctccacgaggggacgctgcgccgccgcggcaaggcgatcatcgaggcggtcgag
cgtggtcgcgagcagcccggcatcccgtcggaggtcgagcgcggccccgcgccgagcgcc
gacgacgcgccgctcatcgccctcggcgaggcgctcgtgcgcacgcgggcggcggaggcc
gaggtcgcgtacgagctgctcgccgcccgcgcggacctgcagaagatcgtcgtcgccgtc
cgcgacgggacgccggacccgcccgtccggacgctcgagggctggcgccgcgaggtcgtc
ggcgccgagctcctcgacctgctgcgcggagggcgctcgctccgcgtcggcccggggcga
cggatcgtcgcgtccgaggcctga
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