KEGG   Paraconexibacter antarcticus: NBH00_15480
Entry
NBH00_15480       CDS       T08278                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
parn  Paraconexibacter antarcticus
Brite
KEGG Orthology (KO) [BR:parn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:parn03016]
    NBH00_15480 (truB)
Enzymes [BR:parn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     NBH00_15480 (truB)
Transfer RNA biogenesis [BR:parn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NBH00_15480 (truB)
 Prokaryotic type
    NBH00_15480 (truB)
SSDB
Motif
Pfam: TruB_N
Other DBs
NCBI-ProteinID: UTI62758
LinkDB
Position
3159917..3160783
AA seq 288 aa
MDRVLLIDKPAGRTSHDLVAEVRRGVGGPRKGPGVVRVGHAGTLDPFATGLLLVLIGRAT
KAQSLFMGLRKTYEVTARFGAVSSTGDTEGEITETGVLPSRPLVLPTGLVRQRPPAYSAI
KIDGERAYARARRGEEVEMPEREVTVYRFEPLPPAGGSGRPDDEPGADERFLIECSSGTY
VRSLVADLGDAYCTSLRRTAIGPFDVTGSADHGTVETGIPLGEALGRVLPVVPLEGAEAG
RAAHGVAVADPRPDPAGARVLIVDADGPVAVAEPRPGGLLKPVVGFRS
NT seq 867 nt   +upstreamnt  +downstreamnt
gtggaccgggtgctgctgatcgacaagcccgccgggcggacctcgcacgacctcgtcgcc
gaggtgcggcgcggcgtcggcggaccgcggaagggccccggggtcgtccgggtcggccac
gccggcacgctcgaccccttcgcaaccggcctgctcctcgtcctcatcgggcgggcgacg
aaggcgcagtcgctcttcatggggctgcgcaagacgtacgaggtcaccgcacggttcggg
gcggtgtcgtcgaccggcgacacggagggcgagatcaccgagacgggtgtcctcccgtcc
cgtccgctcgtcctgccgaccggcctcgtgcgccagcgcccaccggcctacagcgcgatc
aagatcgacggcgagcgcgcctacgcccgcgcccggcgcggggaggaggtcgagatgccc
gagcgcgaggtgaccgtgtaccgcttcgagccgctcccgccggcgggcggtagcggtcgg
ccggacgacgagccgggggccgacgagcgcttcctcatcgagtgctcctcggggacgtac
gtgcggtcgctcgtcgccgacctcggcgacgcgtactgcacgtcgctgcggcggacggcc
atcgggccgttcgacgtgaccgggagcgccgatcacgggacggtggagaccggcatcccg
ctgggcgaggccctcgggcgggtcctgcccgtcgtgccgctcgagggcgccgaggcgggc
cgtgcggcccacggcgtcgccgtcgcggacccgcgtccggaccccgccggcgcccgcgtc
ctcatcgtcgacgcggacggacccgtcgcggtcgccgagccccggccgggcggcctcctc
aagcccgtcgtcggcttccggagctga

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