Paraconexibacter antarcticus: NBH00_15540
Help
Entry
NBH00_15540 CDS
T08278
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
parn
Paraconexibacter antarcticus
Pathway
parn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NBH00_15540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parn03400
]
NBH00_15540
Enzymes [BR:
parn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NBH00_15540
DNA repair and recombination proteins [BR:
parn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NBH00_15540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
OB_YrrC
SH3_13
HHH_5
AAA_11
TraI_hel_assoc_N
Helicase_RecD
PIF1
Viral_helicase1
AAA_25
AAA_22
DEAD
NPHP3_N
HTH_Tnp_4
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UTI62770
LinkDB
All DBs
Position
complement(3171144..3173273)
Genome browser
AA seq
709 aa
AA seq
DB search
MTVAPDTEQRELTAEIVTSRWRAEDGDFAILGVLTDEGEEVTVKGALGHVQIGERATLGG
AWQRHAKHGWQFVVDKVLIAEPVGDAALIAYLASIKHVGPKGAAWLLEKHGDEVLGVIDA
DPERRLRAVPGIGPAKLGAAVRSWETQGALRAVRLFLEQHGVPAAVAARIYRTLGNDAIV
QLQRDPYSLTEVDGIGFATADALARALGVGADSPGRLDAGLVHTLQQAELDGHCHLPRGE
LLVRARRLLGDEAPVEDRLAFLAAAGRVVLEEGRVAEASMYATERALARKVRELLDADAA
FTLGEVERPAGGAFVPTDAQWAVVDHVLEGRLSILTGGPGTGKTASMGTVVDVLRGKGRS
VRLCAPTGKAARRLTETTGVDATTIHRLLEWIPGEGFTRDRTHPIDGADVLIVDEASMLS
VRLAESLLDAVGPRTHVLLVGDVDQLAPVGPGRVLEDLIDSGAVPTVRLTEIFRQAARSM
IVRAAHAINHGEHPPTRPGEGDIHDFFLISRPDASAIFAEIVELAATRLPAHYGLERETD
VQVLAPMHKGPVGIDAFNSALRERRNPDGQVVSGTPLRVGDRVIQTKNDHEHELMNGELA
VVVSYDDDRDAAILACDDGRTLRLPVKDCATLRLGHAISIHKSQGSQMPVVVVPLFRGHH
VMLTRNLVYTALTRAERAAVFVGDTAALGIALGRRDAGTRYTRLAGLLG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgcccccgacaccgagcagcgcgagctgaccgcggagatcgtgacctcccgc
tggcgggcggaggacggtgatttcgcgatcctcggcgtgctcaccgacgagggcgaggag
gtgaccgtcaagggcgcgctcggccacgtgcagatcggtgagcgcgcgacgctcggcggt
gcgtggcagcggcacgccaagcacggctggcagttcgtcgtcgacaaggtgctcatcgcc
gagccggtcggcgatgccgccctcatcgcgtacctcgcgtcgatcaagcacgtcgggccg
aagggggccgcgtggctgctcgagaagcacggcgacgaggtgctcggcgtcatcgacgcc
gaccccgagcggcggctgcgggccgtccccggcatcgggccggcgaagctcggcgccgcc
gtccgctcgtgggagacgcagggcgcactgcgcgcggtgcggctgttcctcgagcagcac
ggcgtcccggcggcggtcgcggcgcggatctaccggacgctcggcaacgacgcgatcgtc
cagctccagcgcgacccgtactccctcaccgaggtcgacgggatcggcttcgcgacggcg
gacgcgctcgcccgggcgctcggggtcggggccgacagcccggggcgcctggacgccggg
ctcgtccacaccctgcagcaggccgagctcgacggccactgccatctcccccgcggcgag
ctgctcgtacgggcgcgccgtctgctgggcgacgaggccccggtcgaggaccgcctcgcg
ttcctggccgcggcgggccgtgtcgtcctcgaggagggccgcgtcgccgaggcgtcgatg
tacgcgaccgagcgggcgctcgcgcgcaaggtccgcgagctgctcgacgcggacgcggcc
ttcaccctcggcgaggtcgagcggcccgcgggcggggcgttcgtcccgaccgacgcgcag
tgggcggtcgtcgaccacgtcctggagggccgcctctcgatcctcaccggcgggccgggc
acgggcaagaccgcgtcgatggggacggtcgtcgacgtcctgcgggggaaggggcgctcg
gtgcgcctctgcgcgccgacgggcaaggcggcgcggcgcctgacggagacgaccggggtc
gacgcgacgacgatccaccggctgctcgagtggatccccggcgagggcttcacccgcgac
cgcacccacccgatcgacggcgccgacgtcctgatcgtcgacgaggcgtcgatgctgtcc
gtccggctcgcggagtccctgctcgacgcggtcggcccccgcacccatgtcctgctcgtc
ggggacgtcgaccagctcgcaccggtcgggcccggccgggtcctggaggacctcatcgac
tcgggcgccgtcccgaccgtccggctcaccgagatcttccgtcaggcggcgcgctcgatg
atcgtccgggccgcccacgcgatcaaccacggcgagcacccgccgacgcggccgggcgag
ggcgacatccacgacttcttcctcatctcccggccggacgcgtcggcgatcttcgccgag
atcgtcgagctcgccgcgacccgcctgccggcccactacgggctcgagcgggagaccgac
gtccaggtcctcgcgcccatgcacaagggcccggtcgggatcgacgccttcaacagcgcg
ctgcgcgagcggcgcaaccccgacggtcaggtcgtctccgggacgccgctgcgcgtgggc
gaccgggtcatccagacgaagaacgaccacgagcacgagctcatgaacggcgagctcgcg
gtcgtcgtgtcctacgacgacgaccgcgacgcagcgatcctcgcctgcgacgacggccgc
acgctgcgcctgccggtgaaggactgcgcgacgctccgcctcggccatgcgatctcgatc
cacaagtcccagggctcgcagatgccggtcgtcgtcgtcccgctcttccgtggtcaccac
gtgatgctcacccgcaacctcgtctacaccgcgctcacgcgggccgagcgcgcggccgtg
ttcgtcggcgacaccgcggcgctgggcatcgcgctcgggcggcgggacgcgggcacgcgg
tacacgcggctggcggggttgctggggtag
DBGET
integrated database retrieval system
