Paraconexibacter antarcticus: NBH00_15670
Help
Entry
NBH00_15670 CDS
T08278
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
parn
Paraconexibacter antarcticus
Pathway
parn00300
Lysine biosynthesis
parn00470
D-Amino acid metabolism
parn01100
Metabolic pathways
parn01110
Biosynthesis of secondary metabolites
parn01120
Microbial metabolism in diverse environments
parn01230
Biosynthesis of amino acids
Module
parn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
parn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NBH00_15670 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NBH00_15670 (dapF)
Enzymes [BR:
parn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NBH00_15670 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UTI62795
UniProt:
A0ABY5DLQ7
LinkDB
All DBs
Position
3203757..3204596
Genome browser
AA seq
279 aa
AA seq
DB search
MRFEKWQALGNDYLVVERDRLPFPLTPARVERLCHRHLGLGSDGILELAPADEPGFVARL
RIFNPDGSEAELSGNGAREAIMYLRRSGWTDQTQFSIQTVAGEIRPTITSDTTCTVDMGR
ARLQSADYPDGPPDGRGVVGGLRFQHVQVGNPQCAIHVPGGVEELEALDLPAIGPAIQHS
PLFPNRTNVSFFCELEPGVVRARIFERGVGETMSSGTGATGAAIAYVLRGGESPVRVVLD
GGELTVDVDEALHVDLSGWAVPVFAGEVSPELIAALEAL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgagaagtggcaggccctcgggaacgactacctcgtggtcgagcgcgaccgg
ctcccgttcccgctcacgcctgcgcgcgtcgagcgcctctgccaccggcacctcggcctc
ggctcggacggcatcctcgagctcgccccggccgacgagcccgggttcgtcgcgcggctg
cggatcttcaaccccgacggctcggaggccgaactgtccggcaacggggcgcgcgaggcg
atcatgtacctgcgccgctccggctggaccgaccagacgcagttctcgatccagacggtc
gcgggggagatccgcccgacgatcacctccgacacgacctgcacggtcgacatggggcgc
gcccgcctgcagtcggcggactacccggacggaccgcccgacgggcgcggcgtcgtcggg
ggcctgcgcttccagcacgtccaggtcggcaacccgcagtgcgcgatccacgtcccgggc
ggggtggaggagctcgaggcgctcgacctgcccgcgatcgggccggcgatccagcactcg
ccgctgttcccgaaccggacgaacgtgtcgttcttctgcgagctcgagcccggggtcgtc
cgcgcgcggatcttcgagcgcggggtcggcgagacgatgtcgtcgggcaccggcgcgacg
ggcgccgcgatcgcctacgtcctgcgcgggggcgagtcgcccgtgcgcgtcgtcctcgac
ggcggcgagctgacggtcgacgtcgacgaggcgctccacgtcgacctcagcggctgggcg
gtccccgtcttcgccggcgaggtcagcccggagctcatcgccgcgctcgaggcgctgtag
DBGET
integrated database retrieval system