Paraconexibacter antarcticus: NBH00_16550
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Entry
NBH00_16550 CDS
T08278
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
parn
Paraconexibacter antarcticus
Pathway
parn03420
Nucleotide excision repair
parn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NBH00_16550
03430 Mismatch repair
NBH00_16550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parn03400
]
NBH00_16550
Enzymes [BR:
parn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NBH00_16550
DNA repair and recombination proteins [BR:
parn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NBH00_16550
MMR (mismatch excision repair)
Other MMR factors
NBH00_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Intein_splicing
PcrA_UvrD_tudor
AAA_30
Hom_end_hint
Hint
AAA_11
Viral_helicase1
Hint_2
Motif
Other DBs
NCBI-ProteinID:
UTI62963
LinkDB
All DBs
Position
complement(3380997..3383849)
Genome browser
AA seq
950 aa
AA seq
DB search
MPDAAPASHLETLLEGLNDPQRQAVVHGEGPLLVLAGAGSGKTRVLTHRIAYLIGTQQAR
PGEILAITFTNKAAQEMRERVGLLLGHSVRSMWVMTFHAACVRILRSEAPRLGYTRQFTI
YDTADSKRLVKRCLDELDLDSKRFTPAAVLHQISDAKNKLRDPDAYKQLTGGYYEQTIGE
VYTLYQSQLHAMNAMDFDDLLNNVVAVLELFPEVRARYQATFRHILVDEYQDTNHAQYRL
LQLLAGDAPDSPQNLMVVGDDGQCLAEGTLVTMADGTRRPIEAVAVGDHVQSCHGEGVFG
PATVLRTSASRRRDGVAITLASGRCVVSTPEHTHFAGFARGTADAEAARASIIHPGEGGR
STPGAGTMVRVVDAVRGRTHGVVRHLARLGAGADGVLPFLPARDVRPGMVMFAEDGALDA
VTSVGTVVLDAPVYDIDVEHTHNFVAGGIVTHNSVYSFRGADISNILNFQDDYPSATQVK
LEQNYRSNQTILSAANAIIGHNRSQIPKTLWTDQGDGDPIVVRELDDEHAEARYVVGEIE
RLVDEGVSRAEIAIFYRTNAQSRVIEDTLVRREIAYQVIGGTKFYERAEIKDAIAYLTIL
GNGQDVVSFTRVANSPRRGIGQTSLSRVISHAATMGIPVWEAAEDPMGVPGLGTAAVKAL
GRFMDTMNGLRARMDDGIPVGDLLEAVLSETGYLEALEAERTIEAQGRTENLQELVEVAR
EFDHATAQDPELEDTVDVFLQQVSLVADADTRQDDEGMVTLMTLHNAKGLEYPIVYLIGC
EEGVFPHSRSIEEGTLEEERRLMYVGITRAMRSLTLTHARRRAVFGGAPNYGLPSRFLAE
LPPDLVDRQGTASGWGAASVASGAPRPRAISSWSGGAIGSASGSGSRSGQTWGNESGATP
SFRMGDDVVHAAFGDGVVTGVESGGVVVVRFASDGSERKLMADYAPITKR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgatgccgcccccgccagccacctcgagaccctgctcgagggtctgaacgacccc
cagcggcaggccgtcgtccacggcgagggcccgctgctcgtgctcgccggcgccgggtcg
ggcaagacccgcgtcctcacgcaccgcatcgcctacctcatcggcacccagcaggcgcgg
ccgggcgagatcctcgccatcacgttcacgaacaaggccgcccaggagatgcgcgagcgc
gtcggcctgctcctcggccactcggtccgctcgatgtgggtcatgacgttccacgccgcg
tgcgtgcgcatcctgcgcagcgaggcgccgcgcctgggctacacccgccagttcacgatc
tacgacacggcggactccaagcgcctcgtcaagcgctgcctcgacgagctcgacctcgac
agcaagcgcttcacgcccgccgcggtcctgcaccagatctccgacgcgaagaacaagctc
cgcgacccggacgcctacaagcagctcaccggcggctactacgagcagacgatcggcgag
gtctacacgctgtaccagtcgcagctgcacgcgatgaacgcgatggacttcgacgacctc
ctgaacaacgtcgtcgccgtcctcgagctcttcccggaggtccgcgcccgctaccaggcg
accttccgccacatcctcgtcgacgagtaccaggacacgaaccacgcccagtaccggctc
ctgcagctactggcgggggacgcgccggactcgccgcagaacctcatggtggtgggtgac
gacgggcagtgcctcgcggaggggacgctcgtcacgatggcggacgggacgcggcggccg
atcgaggcggtcgccgtgggtgaccacgtgcagtcatgccacggcgagggggtgttcggc
ccggcgaccgtccttcgcacgtcggcgtcacgccgccgcgacggcgtcgcgatcacgctg
gcgagcggccgatgcgtcgtgtcgacgcccgagcacacccacttcgccgggttcgcgcgg
ggcaccgcggacgccgaagccgcccgagcgtcgatcatccaccccggtgaggggggaaga
tcgacgcccggtgccgggacgatggtccgggtggtcgacgcggtccgcggccggacgcac
ggcgtcgtccgtcacctggcccggctcggcgcgggcgccgacggcgtgctgccgttcctg
cccgcgcgcgacgtgcgcccgggcatggtcatgttcgcggaggacggggcgctcgacgcg
gtcacgtccgtcgggacggtcgtcctcgacgcacccgtctacgacatcgacgtcgagcac
acccacaacttcgtcgccggcgggatcgtcacgcacaactccgtctactccttccgcggc
gccgacatctcgaacatcctgaacttccaggacgattacccctccgcgacgcaggtgaag
ctcgagcagaactaccgctcgaaccagacgatcctcagcgcggcgaacgcgatcatcggt
cacaaccgcagccagatcccgaagacgctctggaccgaccagggggacggcgacccgatc
gtcgtccgtgagctcgacgacgagcacgcggaggcgcggtacgtcgtcggggagatcgag
cggctcgtcgacgagggcgtctcgcgggcggagatcgcgatcttctaccggacgaacgcg
cagtcccgggtcatcgaggacacgctcgtgcggcgcgagatcgcctaccaggtcatcggc
ggcacgaagttctacgagcgggccgagatcaaggacgcgatcgcgtacctgacgatcctc
ggcaacgggcaggacgtcgtctcgttcacgcgcgtggcgaactcgccgcgccgcggcatc
gggcagacgtcgctctcgcgggtcatcagccacgcggcgacgatgggcatccccgtgtgg
gaggcggcggaggaccccatgggcgtccccggcctcggcacggcggcggtcaaggcgctc
ggccgcttcatggacacgatgaacgggctgcgcgcgcggatggacgacggcatcccggtc
ggtgacctcctcgaggcggtcctcagcgagacgggctacctcgaggcgctcgaggccgag
cggacgatcgaggcgcagggccgcaccgagaacctccaggagctcgtcgaggtcgcccgc
gagttcgaccacgcgaccgcgcaggaccccgagctcgaggacacggtcgacgtcttcctg
cagcaggtctcgctcgtcgccgacgcggacacccggcaggacgacgagggcatggtcacc
ctcatgacgctccacaacgcgaagggcctggagtacccgatcgtctacctcatcggctgc
gaggagggcgtcttcccgcactcgcgctcgatcgaggaggggacactcgaggaggagcgc
cgcctcatgtacgtcggcatcacccgcgcgatgcggtcgctgacgctcacccacgcccgg
cgccgggccgtgttcggcggcgcaccgaactacgggctgccgagccgattcctcgccgag
ctgccgccggacctcgtcgaccggcaggggaccgcgtccggctggggggcggcgagcgtc
gcgtccggtgccccgcgccctcgcgcgatctcctcgtggtcgggcggcgcgatcggatcc
gcgtccggcagcggcagccgctccggccagacgtggggcaacgaatccggcgcgaccccg
tccttccgcatgggggacgacgtcgtccacgccgcgttcggcgacggcgtcgtgaccggg
gtggagagcggcggcgtcgtcgtcgtccgcttcgcctccgacggctccgagcgcaagctc
atggccgactacgcgccgatcacgaagcgctga
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