Paraconexibacter antarcticus: NBH00_17050
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Entry
NBH00_17050 CDS
T08278
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
parn
Paraconexibacter antarcticus
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parn03016
]
NBH00_17050 (thpR)
Enzymes [BR:
parn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NBH00_17050 (thpR)
Transfer RNA biogenesis [BR:
parn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NBH00_17050 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UTI63061
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All DBs
Position
complement(3488311..3488916)
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AA seq
201 aa
AA seq
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MSPHRRHAATGSHRLFVAADPSAPVAAQLTAWGRSQRTRGGGLRVLAASSIHLTLAFLGA
RPAADVGPVSAAVAGSVAEWTAAGGGGAIGLELAAPVWLPPRHPRVLAVEVGDPDGALAA
LQRAVAAGLTAAGLWAPDGRAFRPHLTVARLPARARADPSGPLDPTPAAAFTVDALIVYR
SFLRPEGARYEPLERLALSGP
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgcaccggcgccacgccgccacggggagccaccgcctcttcgtcgcggccgat
ccgtccgctccggtcgccgcgcagctcaccgcctggggccggtcacagcgcacgcggggc
ggcgggctgcgggtcctcgcggcgtcgtcgatccacctgaccctggccttcctgggcgcg
cgcccggcggccgacgtcgggccggtgtccgcggcggtcgcgggctcggtcgccgagtgg
acggcggccgggggaggcggggcgatcggcctcgagctcgccgcgccggtgtggcttccg
ccccggcatccacgggtgctcgccgtcgaggtgggggaccccgacggcgcgctcgcagcg
ctgcagcgcgcggtcgccgccgggctgaccgccgccgggctgtgggctcccgacggccgt
gccttccgcccgcacctcaccgtcgcccgcctgccggcccgggcgcgggcggacccgtcc
gggccgctcgacccgacgccggcggcggcgttcaccgtcgatgcgctgatcgtctaccgc
tcgttcctgcggccggagggcgcgcgctacgagccgctcgagcgcctggcgctgagcggt
ccctga
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