Paraconexibacter antarcticus: NBH00_24295
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Entry
NBH00_24295 CDS
T08278
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
parn
Paraconexibacter antarcticus
Brite
KEGG Orthology (KO) [BR:
parn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parn03019
]
NBH00_24295
Messenger RNA biogenesis [BR:
parn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NBH00_24295
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Zincin_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
UTI64445
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All DBs
Position
4959686..4960624
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AA seq
312 aa
AA seq
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MPPVQSPTASAPPGPGGGASPGPPGSIATLRAGDVVRGTFACTRKDRLTAKTGTTYLAVE
LRDRTGSIAGRVFRDADLVASRFDRGDLVHVQARVERFREELQLDITAIARAPAGDADPS
AFLPVAYRDMEELDGFLEHLAREVHDPGYRGVLERLLTDEPLRTALRRTPCSRGGHHAYL
GGLLEHTVAVATLAQETCLLHPRLNSDLLICAAIVHDLGHTEAFTYGAEIQLGEAGRLLG
HVELGLRIVDRLAAGLPAMDEARRLQLAHCVLTHHGPDQAPGRRFGSVEALTLARLNALD
ASVKGALEQGLP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgtccaatcgccgacggcgagcgcgccgcccggcccgggtggcggcgcgtcg
cccggccctccggggtcgatcgcgaccctgcgcgcgggggacgtcgtccgcggcaccttc
gcgtgcacgcgaaaggaccgcctcaccgcgaagaccgggacgacgtacctcgccgtcgag
ctccgtgaccgcaccgggtcgatcgccgggcgggtcttccgcgacgccgacctcgtcgcc
tcgcgcttcgaccgcggggacctcgtgcacgtccaggcccgggtcgagcgcttccgcgag
gagctccagctcgacatcaccgcgatcgcgcgggcgcccgccggcgacgccgacccgtcg
gccttcctcccggtcgcctaccgcgacatggaggagctcgacggcttcctcgagcacctc
gcccgcgaggtccacgacccgggctatcgcggcgtgctcgagcgcctgctcaccgacgag
cccctgcggaccgcgctgcgccggacgccctgctcgcgcggcgggcaccacgcgtacctc
ggcggcctgctcgagcacaccgtcgcggtcgccacgctcgcgcaggagacgtgcctgctg
cacccgcggctgaacagcgacctgctcatctgcgcggcgatcgtccacgacctcggccac
accgaggcgttcacctacggcgcggagatccagctcggcgaggccggccggctgctcggg
cacgtcgagctcggcctgcggatcgtcgaccggctcgcggccggcctcccggcgatggac
gaggcgcggcggctgcagctcgcccactgcgtcctcacccaccacgggcccgaccaggcc
cccgggcggcggttcggctcggtggaggcgctgaccctcgcgcggctgaacgcgctggac
gcgagcgtcaagggcgcgctggagcaggggctgccctag
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