Paracoccus tegillarcae: CUV01_05305
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Entry
CUV01_05305 CDS
T05237
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
paro
Paracoccus tegillarcae
Brite
KEGG Orthology (KO) [BR:
paro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paro03019
]
CUV01_05305 (hrpB)
Enzymes [BR:
paro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CUV01_05305 (hrpB)
Messenger RNA biogenesis [BR:
paro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CUV01_05305 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
CON_HrpB
HA2_N
AAA_19
AAA_22
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUH32883
UniProt:
A0A2K9ED61
LinkDB
All DBs
Position
complement(1055264..1057738)
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AA seq
824 aa
AA seq
DB search
MQDRLPIDDVLPALSEALAAEGCAVLVAPPGAGKTTRVPLALLDQVRGKILMLEPRRLAA
RAAAERLAEGLHEAVGARVGYRIRGEAVAGTRIEVVTEGILTRMIQSDPALAGIGCVIFD
EFHERSLNADLGLALVWEARGALREDLALLVMSATLEAEPVAALMQGAPVVRSEGRAFPV
ETRWLDRPLPAGARLVDEAARLILLAEAETRETGGTLLAFLPGEGEIRRVMGLLGDSCEV
LPLYGALDAKAQRAALSAPGAQRRVVLATAIAETSLTIPEVRVVVDAGRARRARFDPGSG
MSRLVTERVSRAEADQRRGRAGRVAPGICYRMWARAEEGALPAFAPPEIAVADLTGLALE
LASWGAEPGDLAFLTPPPDGALAEARALLRDLGALDAAGRITDHGRLLTRLPLHPRLAHM
LVVAGPEAADLAALLADRDPLRGAPVDLDLRLKAIRDPRARHPHDINMPALHRIREEARR
LRRLVASRDGGGLSAPRTPRGYLTEEERSGLALGAISALAYPDRVGLRRKGDDPRFVLSG
GKGAVLAASDPLAGQRLIVAVDLEGDAREAKIRMAAALSEAELRGLYPEGVEEHAICEWS
RRDGRVMARLQERFGALVLSDRIWSDVPEDRVAQAVLDGLRLDGLPWSKAAARLRARISL
LRDMPAVDDESLLADGGWLLPWLGKLRTLADIRSLDLVEPLQSLIGWEGQQRLGREAPAH
FLTPLGRKVPIDYDHETPSIELRLQELFGVTQHPAVGGRPLRITLLSPGQKPVQVTIDLP
GFWANSYADVRKDMRGRYPRHPWPEDPTQADPTLRAKPRGGPGR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatcggttgccaattgatgatgttttgcctgccctgtccgaggcgcttgctgca
gaaggctgcgcggtgctggtcgcaccgccgggtgcgggcaagacgacgcgggtgccgctg
gcgctgttggatcaggtcaggggcaagatattgatgctggagccgcgccgcctggccgcg
cgggcggcagccgagcggctggcagaggggctgcatgaggccgttggcgcgcgggtcggc
tatcggatccggggggaggcggtggctggcacgcggatcgaggtggtcacggaaggcatt
ctgacccggatgatccagtctgacccggctctggcagggattggatgcgtcatctttgac
gaatttcacgaacgcagcctgaatgccgatctgggtctggcgctggtctgggaggcgcgc
ggcgcgctgcgcgaggatctggccttgctggtcatgtcggcgacgctggaggccgagccg
gtcgcagcgctgatgcagggcgcgccggtcgtcagatccgagggccgcgcctttccggtc
gagacgcgctggctggatcgaccactgcccgccggtgcgcggctggtcgatgaggcggcg
cgattgatcctgctggccgaggccgaaacccgcgagaccggcggcaccttgctggcgttt
ctgcccggtgagggtgagatccggcgggtgatgggattgctgggcgacagctgcgaggtg
ctgcctctttatggggcgttggatgccaaggcgcagcgggccgcgctgtctgcaccgggc
gcgcagcggcgggtcgtgctggccacggcgattgcggaaacctcgctgacgattcccgag
gtgcgggtggtggtcgatgccggtcgggcaagacgcgcacgattcgatcccggcagcggc
atgtcgcggctggtgaccgaacgcgtcagccgcgccgaggctgatcagcggcgcgggcgt
gcgggcagggtggcgcccggcatctgttaccggatgtgggcgcgggcggaagagggggcc
ttgcccgcctttgcgccgcccgagattgcggtggccgatctgacggggctggcgctggaa
ctggcaagctggggggcagagccgggcgatctggcattcctgaccccgccgcccgatggg
gcgctggcagaggcgcgcgccttgctgcgtgatctgggcgcgctggatgcggcgggtcgg
atcaccgatcatggccggctgctgacacggctgcccctgcatccccgtctggcgcatatg
ctggtcgtcgcgggtcccgaggccgcagatctggcggccctgttggccgatcgcgaccct
ttgcgcggtgcgccagtcgatctggacttgcggctcaaggcaatccgcgatccgcgcgcg
cgccatccccatgacatcaatatgcccgcgctgcaccggatccgcgaagaggccagacgc
ctgcgccgtctggttgcgtcccgcgacggcggggggctgtctgccccccgcaccccccga
ggatatttgactgaagaagaaaggtcgggacttgcgctgggcgcgatatcggcactggcc
tatcctgatcgcgtggggttgcggcgcaagggtgatgatccccgctttgtgctgtcgggg
ggtaagggagcggtgttggcggcgagcgatccgctggccgggcagaggctgatcgtggcg
gtcgatctggaaggtgatgcgcgcgaggcgaagatccggatggcggcggcgttgagcgag
gcggaactgcgtggactgtatcccgagggggtcgaggaacatgcaatctgcgagtggtcg
cggcgtgatggtcgcgtcatggcccgcctgcaagagcggtttggtgccctggttctgtcg
gatcggatctggtctgatgtgcccgaggacagggttgcgcaggcggtgctggacgggctg
cgtttggatggtctgccgtggagcaaggccgcggcccgattgcgggcgcggatatccctg
ctccgggatatgccggcggtggatgacgaaagcctgctggccgatggaggctggctgttg
ccctggctgggcaagctgcggacgctggccgatatccggtcgctggatctggtcgagccg
ttgcaatccctgatcggatgggagggccagcaacgtctgggccgcgaggcgcctgcgcat
tttctgacgccgttgggacgcaaggtgccgattgactatgatcatgagacgccctcgatc
gaactgcggttgcaagagctgttcggcgtcacgcagcatccggctgttggcgggcggccg
ttgcggatcacgctgctgtcgccggggcaaaagccggttcaggtaacgattgacttgccg
gggttctgggccaattcctatgccgatgtgcgcaaggatatgcgcggtcgctatccgcgc
catccttggcccgaagacccgacgcaggcagatccgacattgcgggccaagccgcgtggc
ggcccgggccgttga
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