Paracoccus tegillarcae: CUV01_06890
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Entry
CUV01_06890 CDS
T05237
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
paro
Paracoccus tegillarcae
Pathway
paro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUV01_06890 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paro03019
]
CUV01_06890 (recQ)
03400 DNA repair and recombination proteins [BR:
paro03400
]
CUV01_06890 (recQ)
Enzymes [BR:
paro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUV01_06890 (recQ)
Messenger RNA biogenesis [BR:
paro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUV01_06890 (recQ)
DNA repair and recombination proteins [BR:
paro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUV01_06890 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AUH33150
UniProt:
A0A2K9EDX4
LinkDB
All DBs
Position
complement(1385951..1387990)
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AA seq
679 aa
AA seq
DB search
MDAEQHLRAIWGFDGFRPGQEEIVRAVADGHDVLAIMPTGGGKSLCFQLPALMRDGVTVV
ISPLIALMRDQVRALRAAGVAAGALTSGNTQDETDAVFQALAEGALKILYMAPERLASGG
TLNLLRRAGVTAVAVDEAHCVSQWGHDFRPDYLRIGDLKRDLNVPLAAFTATADAETRAE
IVTRLFDGRPPETFLRGFDRPNIRLAFQPKDGPRKQIMAFAAARRGQSGIIYCASRAKTE
TLADALNRDGMTAVAYHGGMEADLRRATEARFQQEDGLIVTATIAFGMGIDKPDIRWVAH
ADLPKSIEAYYQEIGRAGRDGDPAETLTLYGPDDIRLRRTQVDEGLAENARKEADHGRLN
ALLGLAEATGCRRRQLLGYFGEDMREDCGNCDLCANPPKLFDATQAVRMALSAMLRTGEW
FGAGHLIDILTGSTTEKVRARGHDQLPTFGVGGDFNKGQWQGIFRQMMGRDLCRPDPDRH
GALHLTPAAHPILKGEAQITLRHDTAIKAKTGTVLRTQVSEEDEPLLSALKAKRRALAEA
ARVPAYVIFPDRTLIEMAERRPQTLDAMAQVNGVGAKKLDSYGAAFLAVIAGDVPDMHPA
RRSLAGKPAGALFDRLAETQTRLARGQDGTDKPLSCSTAQLRRIAQARPSDTAALGRYLD
EPRLDRFGVAFLHEILVTD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgaacagcatttgcgcgcgatctggggctttgacggattccgccccggtcag
gaagagatcgtgcgtgcggtcgccgatggccatgacgtgcttgcgatcatgccgacgggc
ggcggcaagtcgttgtgtttccaactgcctgccctgatgcgcgacggcgtgaccgtggtc
atctcgcccctgatcgcattgatgcgggaccaggtgcgcgccctgcgcgcggcgggtgta
gcagcgggcgcattgaccagcggcaacacacaggacgagacagatgcagtttttcaagcg
ctggccgagggcgcgctgaagattctttatatggcgccggaacggctggcatcgggcgga
acgctgaatttgctgcggcgcgcgggcgtgacggcagtcgccgtcgacgaggcgcattgc
gtcagccagtggggccatgattttcgccccgattacttgcggatcggtgatctcaagcgc
gatctgaacgtgccgctggccgcttttaccgccaccgctgatgccgaaacgcgggcagag
atcgtcacccgcctgttcgacggtcgcccgcccgagacctttctgcgcggctttgatcgt
ccaaatatccggctggcctttcagcccaaggacgggccgcgcaagcagatcatggcattt
gcggcggcgcggcgcgggcagtcggggatcatctactgcgccagccgcgccaagaccgaa
acgctggccgacgcgctgaaccgcgacgggatgacggcggttgcctatcacggcggaatg
gaggccgatttgcgccgcgcgaccgaggcgcggtttcagcaagaggacgggctgatcgtc
accgcgaccatcgcctttggcatgggcatcgacaagcctgacatccgctgggtcgcacat
gccgatctgcccaagtcgatcgaggcctattatcaggaaatcgggcgcgcgggccgcgat
ggcgatcctgcagagacgctgaccctctacggccctgatgatatccgcctgcggcgcacg
caggtcgatgaaggattggccgagaatgcccgcaaagaggcggatcatggccggctgaat
gctctgctggggctggccgaggcaacaggatgccggcgccgccagctgctgggctatttc
ggcgaggatatgcgcgaggattgcggcaattgcgatctgtgcgccaacccgcccaagctg
ttcgatgcaacgcaagccgtgcggatggcattgtcagccatgcttcgcaccggcgaatgg
ttcggcgcgggccatctgattgatatcctgaccggcagcacgacggaaaaggtccgtgcg
cgcggccatgatcagctaccgacgttcggcgtcgggggcgatttcaacaagggtcagtgg
caggggatctttcgtcaaatgatgggccgcgatctgtgccgccccgatcccgaccggcac
ggcgcgctgcacctgacccccgcagcacacccgatcctgaaaggcgaggcgcagatcacc
ctgcgccacgacaccgcgatcaaggccaagaccggaaccgttctgcgcacgcaggtctcg
gaagaggacgagccgctgctatccgcgctcaaggcaaaacgccgcgcattggccgaggcg
gcgcgggtgcccgcctatgtcatctttcccgaccgcaccctgatcgaaatggccgagcgc
cggccgcaaacgctggacgcgatggcgcaggtgaacggcgtcggtgcgaaaaagctggac
agctacggcgccgcttttctcgcggtcattgctggcgatgttcccgacatgcacccggcg
cgccgcagcctggccggcaagccggcgggcgcgttgttcgatcgcctggccgaaacgcag
acgcggctggcgcgtgggcaggacggcacggacaagccgctgtcctgttccaccgcgcaa
ttgcgacgcattgcccaggcacgtccatcagataccgctgcgcttggccgctatctggat
gaaccccggctggaccgctttggcgttgcctttctgcacgagattctggtcacggactga
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