Parasphingopyxis sp. CP4: HFP51_02455
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Entry
HFP51_02455 CDS
T09836
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
parp
Parasphingopyxis sp. CP4
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parp03400
]
HFP51_02455 (radA)
DNA repair and recombination proteins [BR:
parp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HFP51_02455 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
AAA_16
AAA_30
AAA
AAA_22
RecA_N
GvpD_P-loop
nSTAND_NTPase5
NACHT
nSTAND3
Rad51
NTPase_1
AAA_29
AAA_5
DAP3
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
QLC21144
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Position
501003..502376
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AA seq
457 aa
AA seq
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MAKAQKRYLCQSCGSVATKWQGQCADCKEWNTLVEDAGGVVTPFQAKHNLQSGGTAVDLV
GLNADIALPDRIGTGIAELDRALGGGLVEGSATLLGGDPGIGKSTLLLQACAIVADAGHD
VTYISGEEAADQIRLRARRLGLGDAPMQLAAATSVRDILTTLGSGKPPALLIIDSIQTMH
SDLIEGAPGTVSQVRASAQELIRFAKERGTALVLVGHVTKDGAIAGPRVLEHMVDTVLSF
EGERSHQYRILRAIKNRFGGTDEIGVFAMVEKGLEEVANPSSLFLTSRKEDVTGAVVFPA
LEGTRPVLVEIQALVVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTSEVYLNV
AGGYRVADPAADLAVAAALISALSERPVAADCVAFGEISLSGEVRTVSHAALRLREASKL
GFRKALLPASIDSRESGMALEGFSALRALVDHLLDRA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcccaaaaacgttatctgtgtcaatcctgcggatcggtcgccaccaagtgg
caggggcaatgtgccgactgcaaggaatggaacacactggtggaagatgccggtggcgtc
gtgacgccatttcaagccaagcataacctgcaatccggcggaactgcggtcgatctggtg
ggtctcaatgccgatatcgccttgccagaccggattggaaccgggattgccgagctggat
cgtgcattaggtggcgggcttgttgaaggctcggctaccttgcttggcggtgatccggga
atcggcaaatcgacgctgttgctgcaagcctgcgcgatcgtcgcagatgccgggcatgat
gtaacctatatttcgggcgaggaggcggcggatcagatccggttgcgcgcacggcggctg
gggcttggcgatgcgccaatgcagctcgctgcagccacctcggtgcgcgatatcctgacg
acgctgggatcgggcaagccaccggcattgctgatcatcgattccatccagaccatgcat
agcgacctgatcgaaggcgcgccgggaacggtcagccaggtgcgcgcctcggcccaggag
ctgatccgcttcgccaaggaacgcggcacggcgctcgtgctggtcggccatgtgacaaaa
gacggcgcgatcgcgggccctcgcgtgctcgaacatatggtcgatacggtgctgagtttc
gaaggcgagcgtagccatcaatatcggatattgcgcgccatcaagaaccgctttggcggg
accgacgaaatcggcgtttttgcgatggtagaaaagggcctggaagaagtcgccaaccca
tcttcactgttccttacgagtcgtaaggaggatgtcaccggtgccgtcgtatttccggcg
ctggaaggcacccggcccgtgctggtcgagatccaggcgctggttgtgcgactggcgagc
ggtgcaaccccacgtcgcgcggtggtcggttgggattctggtcggctggcaatgattttg
gccgtgctagaggcgcggtgcggtctgagcttctcgacatccgaagtctatctgaatgtc
gcgggtggctatcgcgttgccgatcctgccgccgatctggccgtagcagcagcattgatt
tctgccctgtccgaacgcccagttgccgcggattgcgtggcctttggcgaaatatccctg
tctggcgaagtgcgcaccgtatcgcatgcggcattgcggctccgagaggcgtcaaagctc
ggttttcgtaaggccttgctgcccgcatcgatcgacagccgcgaaagcggaatggcgctg
gaaggcttttcagcattgcgcgctttggttgaccatttgctggaccgcgcctag
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