Parasphingopyxis sp. CP4: HFP51_03585
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Entry
HFP51_03585 CDS
T09836
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp00521
Streptomycin biosynthesis
parp00523
Polyketide sugar unit biosynthesis
parp00525
Acarbose and validamycin biosynthesis
parp00541
Biosynthesis of various nucleotide sugars
parp01100
Metabolic pathways
parp01110
Biosynthesis of secondary metabolites
parp01250
Biosynthesis of nucleotide sugars
Module
parp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HFP51_03585 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HFP51_03585 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HFP51_03585 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HFP51_03585 (rfbB)
00525 Acarbose and validamycin biosynthesis
HFP51_03585 (rfbB)
Enzymes [BR:
parp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HFP51_03585 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
DUF6140
STR4_M
Motif
Other DBs
NCBI-ProteinID:
QLC21344
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All DBs
Position
complement(759020..760087)
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AA seq
355 aa
AA seq
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MSAILITGGAGFIGANFVRRWRATHPQDEVLVLDALTYAGHRESIEDVADVELIVGDIGD
FKLVSSLLLDRNIDRIVHFAAESHVDRSIHGPDIFIATNVMGTLNLLKSAKKAWLDSGTG
RPHRFHHISTDEVYGSLAPDAPAFREDTPYAPNSPYSASKAGSDHIVRAYHSTYGLDVTT
SNCSNNYGPYQLPEKLIPLFLTNALHGKGLPIYGDGQHRRDWLHVSDHCRAIESIIDHAS
AGETYNIGGGAELANLDLIDRLCTVMDRAFAADPSLAEAFPAAAAAKGDPTASLKTHIED
RLGHDRRYAVDDSKLVKDLGFERAYTIDDGLEQTVRWYLDNAAWWRAVSAQQKMD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctattctcatcaccggaggcgcgggattcatcggcgcaaactttgtccgccgc
tggcgcgctacccatccccaggacgaagttctagtcctcgatgctctgacttatgctggc
catcgcgaaagcattgaggatgtggcggatgtcgaactgattgtcggcgatattggtgat
ttcaagctggtcagcagcttgctcttggaccgaaatatcgaccggatcgtccatttcgct
gctgagagccatgtcgatcgatcgatccatgggcccgatatctttatcgcgacaaatgtg
atgggcacgctcaacctgcttaagtccgcgaagaaagcctggctggacagcggcacgggc
cgaccgcaccggttccaccacatttcaaccgatgaggtttatggaagtctcgcaccggat
gcgcctgcctttcgagaagacacgccttatgcgccgaattcgccttactcggcatcaaag
gctgggtcggaccacatcgtccgcgcctatcacagtacctatggattggacgtaaccacg
tccaactgctcgaataactacggtccgtatcaacttccggaaaaactgatcccgctgttt
ctcaccaacgcactgcacgggaaaggattgccgatttacggcgacggccaacaccggagg
gattggttgcatgtgagcgaccattgtcgcgcaattgagtcgattatcgatcacgcgtcg
gccggcgaaacttataatattggcggcggagcggaactggccaatctcgatctcatcgac
cggctgtgcactgtaatggatcgcgcatttgctgctgatccaagtctcgctgaggcattt
ccagcggctgcggcagcaaaaggggatccaactgcatcgctaaagacgcatatcgaagac
cggttaggccacgatcgccgatatgccgtcgacgacagcaagttagtcaaagatcttggc
tttgaacgtgcgtacacaatcgatgacgggctcgaacaaaccgtccgctggtatctcgat
aacgcagcgtggtggcgcgctgtatcagcgcaacaaaaaatggattga
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