Parasphingopyxis sp. CP4: HFP51_03960
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Entry
HFP51_03960 CDS
T09836
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp00300
Lysine biosynthesis
parp00470
D-Amino acid metabolism
parp01100
Metabolic pathways
parp01110
Biosynthesis of secondary metabolites
parp01120
Microbial metabolism in diverse environments
parp01230
Biosynthesis of amino acids
Module
parp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HFP51_03960
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HFP51_03960
Enzymes [BR:
parp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HFP51_03960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QLC21410
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All DBs
Position
832947..834194
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AA seq
415 aa
AA seq
DB search
MKPIGPIPMAFADQHGELTIGGLSVSELASSAGQTPYYAYDLDLISAQVERFRKAIPGEV
HLHYAVKANPHPAVIQHLMELTDGLDMASGGELERVRDCGADMAHVSFAGPGKRDPELEL
AISLGATLNLESENEAKRALAAGQRLGITPRLAVRVNPDFELKGSGMSMGGGAKPFGVDQ
DRVPALVKDIISQGADWRGFHIYSGSQSLDVDAIANSQEASIALAAELAQAIGEPPKTVN
LGGGFGIPYTANDTPLDVESLGKRLETALSGRKPILADTQFMIELGRWLVGEAGVYVAQI
LDRKLSKDELFLVTDGGMHHHLAASGNFGMVMKRNYPVAIASQMGAEHTESATIVGPLCT
PLDRLAADIGVPQAEIGDYVAVFASGAYGLSASPINFLSHPHAAEIVVKGGKVTI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgattggaccgatacctatggcctttgcggaccagcacggggagctgacgatc
ggcgggctatccgtatcagagctggcgtccagcgcggggcaaacaccctattatgcctat
gatctcgatctcatcagtgcgcaggttgaacgtttccgaaaggcgataccgggcgaagtt
catcttcattatgcggtaaaggctaacccgcatcccgctgtaatccaacatctaatggag
ctcactgacgggttggacatggcgtcgggcggcgaacttgagcgggtgagagactgtggt
gctgatatggcgcatgtcagctttgctgggcctggtaaacgcgatccggagctggaactg
gccatttcgctgggtgcaacgctcaatctggagtccgaaaacgaggccaagcgggcgctt
gcggccggccaacgccttggcatcacgccgcgccttgccgtgcgggtgaatccggatttt
gagctaaaaggctctgggatgagcatggggggcggcgcgaaaccctttggtgtggatcag
gatcgggttccagcgttggtgaaagatatcatctctcaaggcgcagattggcgagggttt
cacatctattccggttcacaatctctggatgtcgatgcgattgcaaatagccaagaagcc
agtatcgctctggcagctgaacttgcccaagcgattggagagccacccaaaaccgtgaat
ttgggaggtggctttggaattccttacaccgccaatgacacgcccctcgatgtcgaatca
ctcggaaaacgccttgaaacagcgctgagcggccgcaagccaattttggccgatacccag
tttatgattgaacttggtcgctggctggtgggtgaagcaggagtctatgttgcacaaatt
ctcgatcgcaaactgagcaaggacgagctttttctcgttacagacggtggaatgcaccat
cacttggccgcatccggcaatttcggaatggtgatgaaacggaattatccggtcgctatt
gcctcacaaatgggcgctgagcacacggaatctgcaacaattgtggggccattatgcaca
ccactagaccgtttagccgcggatattggcgttccgcaggccgagatcggtgactatgtc
gcggtctttgcatccggcgcttatggtttaagcgcaagccccattaacttcctcagccat
ccgcacgccgccgagatagtggttaagggcggaaaagtaaccatttag
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