Parasphingopyxis sp. CP4: HFP51_05195
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Entry
HFP51_05195 CDS
T09836
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp03030
DNA replication
parp03430
Mismatch repair
parp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFP51_05195
03430 Mismatch repair
HFP51_05195
03440 Homologous recombination
HFP51_05195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parp03032
]
HFP51_05195
03400 DNA repair and recombination proteins [BR:
parp03400
]
HFP51_05195
Enzymes [BR:
parp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HFP51_05195
DNA replication proteins [BR:
parp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HFP51_05195
DNA repair and recombination proteins [BR:
parp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HFP51_05195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_30
AAA_14
AAA_24
AAA_19
AAA_assoc_2
AAA_18
DUF815
Glyco_tranf_2_5
AAA_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
QLC23412
LinkDB
All DBs
Position
complement(1083784..1085445)
Genome browser
AA seq
553 aa
AA seq
DB search
MMDTVPDAGPGLGLDEPPQSAPPESAQPYRVLARKYRPQSFSELIGQDAMVQTLGNAIKR
DRLAHAFLLTGVRGVGKTSTARLIAKALNCIGPDGEGGPTIDPCGQCEPCEAIAEGRHID
VVEMDAASHTGVDDVREIIEAVRYAAVSARYKVYIIDEVHMLSKNAFNALLKTLEEPPPH
VKFLFATTEVNKVPVTVLSRCQRFDLRRIPADRLAEHFGWIVGEEGAEAEDEALALIARA
AEGSVRDGLSILDQAIAHGPDGVTAAQIREMIGLSDRGAVRTLFGQLLAGDAQAVLASIE
EQHDLGTDPAALFRGLLETTHGIVRAKVGGADDPALSAEEREAFADWASRLGFASLHRIW
QLLLKGLHEVETAPMPLEAAEMGLLRIVHAAGMPDPGDLARKLDSGEFSAAPAPATAPSE
SGAETKGAMPADYAAMVRMVAESAHDDESWRAAQYLERDIRLVRYEPPHLVVRPLKPRDE
EFFRDLARLLRKETGEVWTIDTSDEEGEPSLLDQEQAAASAEREAVLQSPMVKAAFDAFP
DAELIDYKLAQGK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatggataccgttcccgatgccggccccggtctcgggttggatgaacctcctcagtcc
gcgccgcctgaaagcgcgcagccctatcgtgtgctggcgcgcaaatatcgcccgcaaagc
tttagtgagctgattggccaggatgcgatggtccagacgcttggcaatgcaatcaagcgc
gacaggctggcccatgcgttcctgctgaccggcgtgcgcggggttggcaagacgtcgacc
gcacggctgatcgcgaaggcgctaaactgtatcggccccgatggtgaaggcgggccgacc
attgatccgtgcggccagtgtgagccatgcgaggcgattgccgaagggcggcatatcgac
gtggtcgagatggacgctgcgtcgcataccggtgtcgatgatgtccgcgagattatcgag
gcggtgcgctatgcagccgtctcagcccgctacaaagtctatatcatcgacgaagtgcac
atgctgtcgaagaatgccttcaatgcgcttctaaagacgctcgaagaaccaccgccgcat
gtgaagttcctgttcgcgacaaccgaagtcaacaaggttcccgtgacggtcttgtcgcgg
tgccagcgattcgacctgcgccgtatcccggccgaccgccttgccgagcatttcggctgg
attgtcggcgaggagggcgcagaggcggaagatgaggcactggcgctgatcgcgcgcgcg
gcggaaggctcggtccgcgacgggctctcgatccttgatcaagcgattgcccatggcccg
gatggggtaacggctgcgcagatccgcgagatgatcggcctgtccgatcgcggtgcggtg
cgcaccctgtttggtcaattattggccggggatgcgcaagcagtgctggcctcgatcgag
gaacagcatgatctgggtacagatccggcggcgctgttccgcggcctgctggaaacaacc
catggcattgtccgcgcgaaagtgggcggtgctgatgatccggccctgtcagcagaagag
cgtgaagcttttgcagattgggcgagccgtttgggtttcgcctcgctgcatcggatatgg
cagttgctattgaaaggactgcacgaggtagagacggcaccaatgccgctggaagcagcg
gaaatgggattgctgcggatcgtccatgcggcaggcatgcctgaccctggcgatctggct
cgtaagctcgatagcggggaattttcagccgcgccggcaccggccaccgcgccgagtgaa
tcgggtgcagagaccaagggcgcgatgcccgccgattatgcagcgatggtccgcatggtg
gccgagagcgcgcatgacgacgaaagctggcgcgcggcacagtatctcgaacgcgatatc
cgattggtacgctatgagccgcctcatctggtggtgcgcccgctgaaaccccgcgatgag
gaattcttccgcgatcttgcgcgtttgctgcgcaaggaaaccggtgaagtctggacgatc
gacacgagcgatgaggaaggcgagccgagcttgctcgaccaggaacaggccgcggcgagc
gcagagcgcgaagctgtgctacaatcgccgatggtcaaggcggcctttgacgcctttccc
gatgcggagctgatcgattacaagcttgcccaaggcaaatag
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