Parasphingopyxis sp. CP4: HFP51_06340
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Entry
HFP51_06340 CDS
T09836
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HFP51_06340 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parp03400
]
HFP51_06340 (recO)
DNA repair and recombination proteins [BR:
parp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HFP51_06340 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HFP51_06340 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Ig_NUP210_16th
Motif
Other DBs
NCBI-ProteinID:
QLC21827
LinkDB
All DBs
Position
complement(1306209..1306940)
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AA seq
243 aa
AA seq
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MHLRTRALVCALRPHGEHGTIARLMTPESGLMAGYVRGGRSRRIRPVLLPGNIVEAEFRA
RTEDQLPGLTIELVASRSGLFGEPLPAAAIEWACALTAAILPEGQGYPRIYAALDGVLAA
IEAAPAARRWASALVRYELLLLSELGFGLDLSQCVVTGSSEELLWVSPKSGAAVSKEAGE
AHREKLLSLPGFLSAGGEADDWDQIFDGLRLTGHFLARDLLDERRNDVMAARERLVERLR
RAA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcgcactcgcgccctagtttgcgcccttcgcccgcatggcgaacatggcacg
atcgcccggcttatgacgccggaaagcggccttatggctggctatgtgcgcggcggacgg
tcgcggcgcattcgcccggtattgctacccggcaatattgttgaagcggagtttcgcgcg
cgcacagaggatcaacttcccgggcttacaatcgagctggtggcgagccggagcggcctg
tttggcgaacccttgccggctgctgcgattgaatgggcgtgcgcgctgacagcggctatc
ctgccggagggccagggatatccgcggatttacgctgcgcttgatggcgtgcttgcggcg
atcgaggccgctccagccgcacggcgctgggcttcggcgttggtgcggtatgagctgttg
ctcctgtccgaactcggctttggccttgatctgagccagtgcgtggtcacgggcagtagt
gaagaattgctgtgggtcagtccgaaaagtggagcagcggtcagcaaggaagcgggcgaa
gcgcatcgcgagaaactcttaagcctgccgggctttctatcggcaggtggcgaagccgac
gattgggatcagatattcgacggattgcgcctgaccggccattttcttgcaagagacctg
ttggacgagcggcgcaatgatgtaatggcggcacgcgaaagactggttgagcgtctacga
cgcgcggcttga
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