Parasphingopyxis sp. CP4: HFP51_08320
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Entry
HFP51_08320 CDS
T09836
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HFP51_08320 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parp03019
]
HFP51_08320 (groL)
03110 Chaperones and folding catalysts [BR:
parp03110
]
HFP51_08320 (groL)
03029 Mitochondrial biogenesis [BR:
parp03029
]
HFP51_08320 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
parp04147
]
HFP51_08320 (groL)
Enzymes [BR:
parp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HFP51_08320 (groL)
Messenger RNA biogenesis [BR:
parp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HFP51_08320 (groL)
Chaperones and folding catalysts [BR:
parp03110
]
Heat shock proteins
HSP60 / Chaperonin
HFP51_08320 (groL)
Mitochondrial biogenesis [BR:
parp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HFP51_08320 (groL)
Exosome [BR:
parp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HFP51_08320 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HFP51_08320 (groL)
Exosomal proteins of breast cancer cells
HFP51_08320 (groL)
Exosomal proteins of colorectal cancer cells
HFP51_08320 (groL)
Exosomal proteins of bladder cancer cells
HFP51_08320 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
REF
Motif
Other DBs
NCBI-ProteinID:
QLC22180
LinkDB
All DBs
Position
complement(1730645..1732291)
Genome browser
AA seq
548 aa
AA seq
DB search
MAGKDVKFGRDARERIMSGVDILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKDI
ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVTNVVADVQKRSKNVKSSDEVAQVGVISANGDIEVGQKIAEAMDRVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFVTNPEKMNVELENPYILIHEKKLSSLQDMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGEM
ISEDLGIKLDSVTLGMLGEAKRVTIDKDNTTIVDGAGQKKAIAGRVEAIRQQIESTTSDY
DREKLQERLAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGTALL
YATKSLKGLEGANDDQTRGVDIVRKALYAPVRQIAENAGHDGAVVSGKLLDGKDAKLGFN
AQTDTYEDLVKAGVIDPTKVVRAALQDAASVAGLLITTEATVAELPEDNAPAAPAMPDMG
GMGGGMGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtaaagacgtaaaattcggccgcgacgcgcgtgagcgcatcatgagcggtgtc
gacattctcgccgacgcagtgaaggtcacgctcggtcccaagggccgtaacgttgtgctc
gacaagagcttcggcgcgccacggatcaccaaggacggcgtaaccgtcgccaaggacatc
gaactgaaagacaagttcgaaaatatgggcgctcagatggtcaaggaagttgcttccaag
accaatgacgttgccggtgacggcaccacgactgcaacggttctcgcacaggcgattgtt
cgcgaaggcatgaagtcggttgctgctggcatgaacccgatggatctcaagcgcggcatc
gaccttgctgtcactaacgttgtcgccgatgtccagaagcgttccaagaatgtgaaaagc
tcagacgaagtcgcccaggttggtgttatctccgccaatggcgatatcgaagttggccag
aaaatcgctgaagcgatggaccgtgtcggcaaggaaggcgtgatcacggttgaagaagcc
aagggtctcgaattcgaactcgatgttgttgaaggcatgcagttcgatcgcggctatctc
agcccctatttcgtcaccaatccggaaaagatgaatgtcgagctcgaaaacccgtacatc
ctgatccacgaaaagaagctttcgagcctgcaggacatgctgccgatcctcgaagccgtg
gttcagtcgggtcgtccgctgttgatcatcgctgaagacattgaaggcgaagcgctggct
actctggtggtcaacaagctgcgtggcggcctgaaggttgcagcggtcaaggcgcctggc
ttcggtgatcgtcgcaaggcgatgctcgaagacattgcgatcctgaccaagggcgaaatg
atctccgaagatctcggcatcaagctggactcggttacgctcggtatgctcggcgaagcc
aagcgcgtcaccatcgacaaggacaacacgaccatcgtcgacggtgcgggccagaaaaag
gcaattgccggtcgcgtagaagcgatccgtcaacagatcgaaagcacgaccagcgactat
gatcgcgagaagcttcaagagcgtcttgctaagcttgctggcggcgttgccgtgatcaag
gttggcggtgccaccgagatcgaagtgaaagagaagaaggaccgggttgacgatgctctg
cacgcaacgcgcgccgctgttgaagaaggtatcgtccctggcggcggaaccgcgcttctc
tatgccactaaatctctgaagggccttgaaggcgccaatgatgatcagacgcgcggcgtc
gatatcgtccgcaaggcgctctacgcaccggttcgtcagattgctgaaaatgccggccat
gatggcgcggttgtttcgggcaagctgcttgacggcaaagacgcaaagctcggctttaat
gcccagaccgatacctatgaggatttggtcaaggctggtgtcatcgacccgaccaaggtt
gtccgtgctgctctgcaggacgccgcctcggttgctggtctgctgatcaccaccgaagcc
acggttgctgagcttccagaagacaatgcacctgctgctccggcgatgccggacatgggt
ggcatgggtggcggcatgggcttctaa
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