Parasphingopyxis sp. CP4: HFP51_08375
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Entry
HFP51_08375 CDS
T09836
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp00020
Citrate cycle (TCA cycle)
parp00640
Propanoate metabolism
parp00660
C5-Branched dibasic acid metabolism
parp00720
Other carbon fixation pathways
parp01100
Metabolic pathways
parp01110
Biosynthesis of secondary metabolites
parp01120
Microbial metabolism in diverse environments
parp01200
Carbon metabolism
Module
parp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
parp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HFP51_08375 (sucD)
00640 Propanoate metabolism
HFP51_08375 (sucD)
00660 C5-Branched dibasic acid metabolism
HFP51_08375 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HFP51_08375 (sucD)
Enzymes [BR:
parp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HFP51_08375 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QLC22191
LinkDB
All DBs
Position
complement(1743640..1744524)
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AA seq
294 aa
AA seq
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MSILVDSNTKVITQGMTGDTGTFHTQQGLDYGTKMVAGVTPGKGGTEHLGLPVYDTVVEA
RDATGADASVIYVPPKFAAASIIEAIEAEIPLIVTITEGIPVLDMVTVKGHLDKSNSRLI
GPNCPGVLTPNECKIGIMPGSIFSKGSVGVVSRSGTLTYEAVHQTTAVGLGQSTAVGIGG
DPVNGTNFIDVLEMFLADDETESIVMIGEIGGSAEEEAAQFLADEAKAGRSKPVVGFIAG
RTAPPGRRMGHAGAIVSGGKGGADDKIAAMEAAGIAVSPSPSELGTTLAELLKG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcatactcgtcgacagcaacaccaaggtcatcacccagggcatgaccggtgacacc
ggcacattccacacccagcaaggtttggattacggcaccaagatggtcgccggcgttacg
ccgggcaaaggtgggacggagcatctcggcctgcccgtctatgatacggttgttgaagcg
cgcgatgcgaccggcgcggacgccagcgtgatttacgtgccgccgaaatttgctgcggca
tcgattatcgaggcgatcgaagcggagatcccgctgatcgtgacaattaccgaaggcatt
cccgtgctcgatatggtcacggtcaaaggccatctcgacaagtccaattcgcggctgatc
gggccgaactgtcccggtgtcctgaccccgaatgaatgcaagatcggcatcatgcccggc
agcattttttccaagggttcggtgggcgttgtaagtcgatccggcacgctcacctatgaa
gctgtccatcagacaacggctgtaggtctgggccagtcgacggcggttggtattggcggc
gatccggtgaacggtaccaactttatcgacgtgctcgagatgttcctcgctgatgatgag
acagagtcgatcgtcatgatcggcgaaatcggtggtagcgctgaagaagaagccgcccaa
ttccttgcggacgaagcaaaggccggccgctctaagcccgtcgttggcttcattgctggt
cgcaccgcgcctccaggccgccggatgggccatgccggtgcgattgtatcgggcggcaag
ggcggtgcagatgacaaaatcgcggcgatggaagccgctggtattgcggtatcgcccagc
ccgtcggaactcggcacaacactcgcggaactgctcaagggttga
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