Parasphingopyxis sp. CP4: HFP51_11660
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Entry
HFP51_11660 CDS
T09836
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HFP51_11660 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parp03400
]
HFP51_11660 (ung)
Enzymes [BR:
parp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HFP51_11660 (ung)
DNA repair and recombination proteins [BR:
parp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HFP51_11660 (ung)
Prokaryotic type
HFP51_11660 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QLC22778
LinkDB
All DBs
Position
2384870..2385640
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AA seq
256 aa
AA seq
DB search
MPVDNDSGEGRFEFAARRAYPCAMAGEIKLHESWKAPLQGEFDASYMADLRAFLVSERQA
GKTIFPAGSLWFHALDATPLPKVRAVILGQDPYHGPGQAHGLCFSVRPGVRPPPSLVNIY
KELETDLGIPRANHGHLERWANQGVLLLNSVLTVESGMAASHRGRGWEQFTDAIIRLVAD
KSEPVVFLLWGSYAQKKAAFVESIDQGGRHCVLKAPHPSPLSAHNGFFGSGHFSKANAFL
ESVGREPIGWALPEAT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgacaatgacagtggggaagggcggtttgaatttgcggcccgccgcgcatac
ccctgtgccatggctggcgagatcaaattgcatgaaagctggaaagcgccgctccagggg
gagttcgacgcgtcctatatggcggatttgcgcgcctttttggtcagcgagcgccaggcg
ggcaaaaccattttcccggccggatcgctctggttccatgcgcttgatgcgacgccgctg
cccaaggtccgcgccgtcatccttggccaggatccctatcacgggccgggccaggcgcat
ggcttatgcttttccgtgcgccccggcgtccgccctccgcccagcctcgtcaatatctac
aaggaactggaaaccgacctcggcatcccacgcgccaatcacgggcatcttgaacgttgg
gcgaaccagggcgtgttgctcctgaacagcgtgctcaccgtcgaatccggcatggccgcc
tcgcatcgcgggcgcggctgggaacaattcaccgatgcgatcatccggctggtggccgac
aaatccgaaccggtcgtgttcctcctctggggcagctatgcgcaaaagaaagcggccttc
gtcgaaagcatcgaccaaggcggccgccactgcgtgctaaaagcgccgcatccatcgccg
ctgtcagcgcataatgggttttttgggagcggacatttttccaaggcgaacgcgtttttg
gaaagtgtgggcagggaaccgattgggtgggcgctgccggaggccacctag
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integrated database retrieval system
