Paraconexibacter sp. AEG42_29: DSM112329_01470
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Entry
DSM112329_01470 CDS
T10662
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
parq Paraconexibacter sp. AEG42_29
Pathway
parq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM112329_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parq03019
]
DSM112329_01470
03400 DNA repair and recombination proteins [BR:
parq03400
]
DSM112329_01470
Enzymes [BR:
parq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM112329_01470
Messenger RNA biogenesis [BR:
parq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM112329_01470
DNA repair and recombination proteins [BR:
parq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSM112329_01470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RcsC
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XAY04635
UniProt:
A0AAU7ASH0
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All DBs
Position
1525744..1527825
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AA seq
693 aa
AA seq
DB search
MTTTQTTTDDAALAHLHALAGPDAVFRDGQLEAIRDLVDDRARVLCVQRTGWGKSAVYFV
ATALLRERGSGPTLIVSPLLALMRNQIAAAERLGIRARTINSTNVGEWRDVQDALARDEV
DLLLISPERLNHARFRDEMLPLFASSIGLLVVDEAHCVSDWGHDFRPDYRRIRDMIARLP
EGVAVLGTTATANDRVVADVTEQLAAGDDRALRSYRGPLGRSSLRLEVCELPSQAARLSW
LAQVLPTLQGSGIVYTLTKRDADVVAGFLTAHGVSAAAYSGDQPSEERIVIEDRLLRDDL
KAVVATSALGMGYDKADLGFVVHFQAPGSVISYYQQVGRAGRGVDHADVVLLRGHEDRRI
QDFFIEQAFPRREHVERVLEQLSTGDGATVPQLQSAVNLGRGRLEAMLKILEVEGAVRKD
GTRWSTTGAEWHYDAARYSAITALRRTEQAAMASFGADGRCLMRALQEELDDPSPTDCGR
CAVCTEPRFAIESDPVLVAEAMRTLRSRPLTLDPKKMAPDRETGTMKKLPPDVVIGEGRA
LGRAGDDGWDPLVRAGLDAGVVDDELIGALAEVVREWGPPVAWVACVPSRRTGARGDVVA
DVAARLAAALGLPFAPVLARADASRPPQARMRNAAQQAENVRGAFAVTSDLPPGACLLVD
DIRQSGWTLAMSGGQLRRRGAEQVFPLTLRTSF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacgcagacgaccaccgacgacgccgccctcgcgcacctgcacgcgctcgcc
ggccccgacgccgtcttccgcgacggccagctcgaggcgatccgggacctcgtcgacgac
cgtgcccgcgtgctctgcgtccagcgcaccggctggggcaagagcgccgtctacttcgtc
gccaccgccctcctgcgcgagcgcggctcagggcccaccctgatcgtctccccgctgctg
gcgctgatgcgcaaccagatcgccgcggccgagcggctcgggatccgcgcgcggaccatc
aactcgacgaacgtgggggagtggcgggacgtgcaggacgcgctcgcccgggacgaggtc
gacctgctgctgatcagcccggagcggctgaaccacgcgcggttccgcgacgagatgctg
ccgctgttcgcgtcgtcgatcgggctgctggtcgtcgacgaggcgcactgcgtcagcgac
tggggccacgacttccgcccggattaccgccgcatccgcgacatgatcgcccgactgcca
gagggcgtcgcggtgctcgggacgacggccaccgcgaacgaccgggtcgtcgccgacgtc
accgagcagctggccgccggcgacgaccgcgcgctgcggtcctaccgcggcccgctcggc
cgctcgtcgctgcgcctggaggtctgcgagctgccctcccaggcggcccgcctgagctgg
ctcgcccaggtcctgccgacgctgcagggctccggcatcgtctacacgctgaccaagcgg
gacgcggacgtcgtcgccggcttcctcaccgcccacggcgtgagcgcggccgcctactcc
ggcgaccagccgtccgaggagcgcatcgtcatcgaggaccgcctgctccgggacgacctg
aaggcggttgtcgccaccagcgcgctcggcatgggctacgacaaggccgacctgggcttc
gtcgtccacttccaggcgcccgggtcggtcatctcctactaccagcaggtcggacgcgcg
ggacgcggcgtggaccacgcggatgtcgtcctcctgcgcggccacgaggaccgccgcatc
caggacttcttcatcgagcaggcgttcccgcggcgcgagcacgtggagcgcgtgctcgag
cagctctcgacgggggacggcgcgacggtgccgcagttgcagtcggcggtcaacctgggc
cgcggacggctcgaggcgatgctgaagatcctcgaggtcgagggggcggtgcgcaaggac
ggcacccgctggagcacgaccggcgccgaatggcactacgacgcggctcggtacagcgcc
atcaccgcgctgaggcgcaccgagcaggcggcgatggcgtcgttcggcgccgacggccgt
tgcctgatgcgggcgctccaggaggagctggacgatccgtcccccaccgactgcgggcgc
tgcgcggtctgcaccgagccccggttcgcgatcgagtccgatcccgtccttgtcgccgag
gcgatgcggacgctgcgctcacggccgctgaccctcgacccgaagaagatggctcccgac
cgcgagacggggaccatgaagaagctgccgccggacgtcgtcatcggcgagggccgtgcg
ctcgggcgggcgggtgacgacggctgggacccgctcgtgcgcgccggcctcgacgccggc
gtggtcgacgacgagctgatcggcgcgctggccgaggtcgtgcgcgagtgggggccaccc
gtcgcctgggtcgcctgcgtcccgtcccgccgcacgggtgcccgcggcgatgtggtcgcc
gacgtcgccgcgcggctcgccgccgcgctgggcctgccgttcgcccctgtcctggctcgc
gccgacgcctcccggcccccgcaggcccggatgcgcaacgcggcccagcaggccgagaac
gtccgcggcgcgttcgcggtcacgtcggacctcccgccgggcgcatgcctgctggtcgac
gatatccgccagtcgggatggacactcgcgatgagcggcggacagctgcgccggcgcggg
gccgagcaggtgttcccgctgacgctgcgcaccagcttctga
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