Paraconexibacter sp. AEG42_29: DSM112329_01754
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Entry
DSM112329_01754 CDS
T10662
Symbol
mutM_1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
parq Paraconexibacter sp. AEG42_29
Pathway
parq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM112329_01754 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parq03400
]
DSM112329_01754 (mutM_1)
Enzymes [BR:
parq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSM112329_01754 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM112329_01754 (mutM_1)
DNA repair and recombination proteins [BR:
parq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM112329_01754 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_NUD
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
XAY04916
UniProt:
A0AAU7ATI7
LinkDB
All DBs
Position
complement(1820030..1820926)
Genome browser
AA seq
298 aa
AA seq
DB search
MPELPEVEAARTLIAERAVGRTVAAVDDADTYVCRPHLPGDIASALVGRTLTAAGRIGKS
MFLDTDDGDGPILGLHLGMAGRMVFVDGEDAQVTAYAGDPMSANEILAAAGAGANASTEA
PAPPAGGHPDPRLSGDPAWARFTITFDDDAALILFDKRRLGRAVLNPDLSRLGPDALLVP
KATFRERVGVGEAPLKARIMDQSVIAGVGNLLADETLWQARLAPLRPAGTLTTDELDDLW
KVLRRCTRAAMKHGGVHTGRVIEFRKKDAACPRCGGAMVKAAVGGRTTWWCSVEQAWP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtcgaagccgcgcggaccctgatcgccgagcgcgccgtcggc
cgcaccgtcgccgccgtcgacgacgccgacacctacgtgtgccggccccacctgcccggg
gacatcgcctcggcgctggtcggccggaccctgaccgcggccggccgcatcggcaagtcg
atgttcctggacaccgacgacggcgacggcccgatcctcggcctgcacctcggcatggcg
ggccggatggtgttcgtcgacggcgaggacgcccaggtcaccgcctacgccggcgacccg
atgtccgccaacgagatcctggcggcggcgggcgcgggcgcgaatgcgtccaccgaagcg
ccggcgccacccgcgggcgggcaccccgacccgcgcctgtcgggcgacccggcctgggcg
cgcttcaccatcaccttcgacgacgacgcggcgctgatcctgttcgacaagcgccgcctc
ggccgcgccgtcctgaaccccgacctctcgcggctggggccggacgcgctgctggtcccg
aaggcgacgttccgcgagcgcgtcggcgtcggcgaggcgccgctgaaggcgcggatcatg
gaccagtcggtgatcgcgggcgtcggcaacctgctggccgacgagacgctctggcaggcg
cggctcgcgcccctccgcccggcggggaccctcaccaccgacgagctcgacgacctctgg
aaggtgctgcgccgctgcacccgggcggccatgaagcacgggggcgtccacaccggccgc
gtgatcgagttccgcaagaaggacgccgcctgtccccgctgcggcggcgcgatggtcaag
gcggcggtcggcggccggacgacgtggtggtgctcggtggagcaggcctggccgtag
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