Paraconexibacter sp. AEG42_29: DSM112329_01789
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Entry
DSM112329_01789 CDS
T10662
Name
(GenBank) Putative bifunctional exonuclease/endonuclease protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
parq Paraconexibacter sp. AEG42_29
Pathway
parq03030
DNA replication
parq03430
Mismatch repair
parq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM112329_01789
03430 Mismatch repair
DSM112329_01789
03440 Homologous recombination
DSM112329_01789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parq03032
]
DSM112329_01789
03400 DNA repair and recombination proteins [BR:
parq03400
]
DSM112329_01789
Enzymes [BR:
parq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM112329_01789
DNA replication proteins [BR:
parq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM112329_01789
DNA repair and recombination proteins [BR:
parq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM112329_01789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XAY04951
UniProt:
A0AAU7ATC7
LinkDB
All DBs
Position
1855485..1857215
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AA seq
576 aa
AA seq
DB search
MSAAATPAVRAPLGASSLRTAEFLVVDTETNGLAGDRCELTEVGAVLVGGGELHDRWEAL
VQVRAPLSRSIQRFTGITQAMVDEAPAADVTLRELAGLLHGRVLVAHNASFDRRVLEQAF
GRAGLAWPAPPTLCTVALARRLAPLVRQRKLALLADALGIPVEVTHRALADAETCARIFC
ALLPRLAATATTIDEALAVLGPARPRRGPAARGRTDGGVTMKGVRRRSPDLRRFPDAPGA
YVFRNDAGQPLYVGKSVRLRSRARSHFAPSSPDTGWVTQVEVAEYVQTPSELGALLEEHR
LIKALRPPGNARGKHDRDKYVYLRCRLDIAFPVLEVSAEPADGLAINVGPLQGAHAATEL
MEQLNSLFGLRHCGRTLKRRPWASAYGQMGRCLSPCLGDLDPNAYRGRLDEALGLFAAAG
PTGGGLLAHVDGLVAAAAAEEAYERAGWLRRRRERLAVLLERLGRSVAATHATPRVVLAP
SLPAGSADAVWTVAGRIVRWEAIGSLAELTAGTDAVLAAAGHVRPGVPQHLTADDVARGR
IVSTWCAAQDPPALDLHPAPTRAALRRLAVQAGLAV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagccgccacaccggccgtgcgggctccgttgggtgcgtcgtcgctgcgcacc
gcggagttcctcgtcgtcgacaccgagaccaacggcctggcgggtgaccgctgcgagctg
accgaggtcggcgcggtgctcgtcggcggcggcgagctgcacgaccgctgggaggccctg
gtgcaggtgagggcgccgctctcgcggtcgatccagcggttcaccggcatcacgcaggcg
atggtcgacgaggccccggccgccgacgtgacgctccgcgagctggccggactgctgcac
ggccgcgtcctcgtcgcgcacaacgcctccttcgaccggcgcgtgctcgagcaggcgttc
ggccgggccggcctggcgtggccggcgccgccgacgctctgcacggtcgccctcgcgcgg
cggctcgccccgctggtgcgccagcgcaagctcgccctgctcgcggacgcgctcggcatc
ccggtcgaggtgacgcaccgcgccctcgcggacgccgagacctgcgcccgcatcttctgc
gcgctgctgccgcgcctcgcggccactgcgaccacgatcgacgaggcgctcgcggtgctc
gggcctgcgcgaccgcggcgtggtccggcggcccgggggcggaccgacggcggcgtgacg
atgaagggcgtgcggcggcgctcgcccgacctgcgccgcttccccgacgcgccaggggcg
tacgtcttccgcaacgacgccggccagccgctctacgtgggcaagtcggtccggctgcgc
tcgcgggcccggtcgcacttcgcgccgtcgtcccccgacaccggctgggtgacgcaggtc
gaggtggcggagtacgtccagacgccctcggagctcggcgcgctgctggaggagcaccgg
ctgatcaaggcgctgcgtcccccgggcaacgcccgcggcaagcacgaccgcgacaagtac
gtctacctgcggtgccgtctggacatcgccttcccggtcctggaggtgtcggccgagccg
gccgacggccttgcgatcaacgtcggcccgctgcagggcgcgcacgcggcgaccgagctc
atggagcagctgaactcgctgttcggcctgcggcattgcggccggacgctgaagcgccgg
ccgtgggcgtcggcctacgggcagatgggccgctgcctgtcgccgtgcctgggcgacctg
gacccgaacgcctaccgcggccgcctcgacgaggcgctcgggctgttcgccgcggcaggg
ccgaccggcggcgggctgcttgcgcacgtcgacggcctggtcgcggcggcggccgccgag
gaggcctacgagcgggcgggctggctgcggcgccggcgggagcggctggcggtgctgctc
gaacgcctgggccggtcggtcgcggcgacgcacgcgacgccgcgggtggtccttgcgccg
tcgctgccggcggggtcggccgacgcggtctggaccgtcgccgggcggatcgtccgctgg
gaggcgatcggctcgctcgccgagctgacggcggggacggacgcggtcctggccgcggcc
gggcacgtgcggcccggggtcccgcagcacctgacggccgacgacgtcgcgcgtggccgg
atcgtcagcacctggtgcgcggcgcaggacccgccggcgctggatctgcacccggcgccg
acgcgagcggcgctgcggcggctggcggtgcaggcggggctggcggtctga
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