Paraconexibacter sp. AEG42_29: DSM112329_01829
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Entry
DSM112329_01829 CDS
T10662
Symbol
sigB_1
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
parq Paraconexibacter sp. AEG42_29
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parq03021
]
DSM112329_01829 (sigB_1)
Transcription machinery [BR:
parq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM112329_01829 (sigB_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
DUF7343
HTH_37
HTH_10
HTH_3
HTH_24
TPR_9
HTH_ParB
Dimerisation
HTH_AraC
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
XAY04988
UniProt:
A0AAU7ATK0
LinkDB
All DBs
Position
complement(1895375..1896178)
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AA seq
267 aa
AA seq
DB search
MSSATSHPNHRDRERELLERYHRDGDHSARQEVVERSIDLVHYVARRYQNRGIAYEELVQ
AGSIGLLKAVDRFDLDRGVTLSTFAIPNILGEIRRYFRDNGWAMRVPRSIQENSAKVTSV
TDRLTTKLQRVPTVSEIADMAELTVEQVLEAMEGARAYSLGSLDAPIESGEDDFSGHDRL
GAEDPGFQRAEARLAVLHGMRVLRDRERQIIALRFGRDMTQLEIAQELGISQMHVSRLLR
VALDDLRQELERRPSEAGDRPLAEATG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgccacttcgcaccccaaccaccgcgaccgtgagcgggagctccttgagcgc
taccaccgtgacggcgaccacagcgcccgccaagaagtcgtagagcggtcgatcgacctc
gtgcactacgtcgcgcgccgttaccagaaccgcggtatcgcctacgaggagctggtccag
gccggctccatcggtctgctcaaggccgtggaccgcttcgacctcgaccgcggcgtcacg
ctgtccacattcgctatcccgaacatcctcggcgagatccggcggtatttccgcgacaac
ggctgggcgatgcgcgtgccgcgctcgatccaggagaactccgcgaaggtgacctccgtc
accgaccgcctcaccaccaagctgcagcgcgttcccaccgtgtcggagatcgccgacatg
gccgagctcaccgtcgagcaggtcctcgaggccatggagggcgcccgcgcctattccctc
ggctccctcgacgcgcccatcgagtccggcgaggacgacttctcaggccacgaccgcctc
ggcgccgaggatcccggcttccagcgcgcggaggcccgcctggccgtcctgcacggcatg
cgcgtcctacgcgaccgcgagcggcagatcatcgcgctccgcttcggccgggacatgacg
cagctcgagatcgcgcaggagctcggcatctcgcagatgcacgtctcccgcctgctccgg
gtcgctctggacgacctgcgccaagagctcgagcgccggccctccgaggcgggcgaccga
ccgctcgccgaagccaccggctga
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